Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDX1P52945 RPL32P3-201ENST00000359025 275 ntBASIC4.74□□□□□ -1.65
PDX1P52945 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 SNORA70.10-201ENST00000384515 134 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AL356967.1-201ENST00000406305 431 ntBASIC4.74□□□□□ -1.65
PDX1P52945 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 AL158050.1-201ENST00000416077 457 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 VN1R42P-201ENST00000424651 344 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 AL512637.2-201ENST00000431287 1256 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC005154.2-201ENST00000438110 379 ntBASIC4.74□□□□□ -1.65
PDX1P52945 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC012512.1-201ENST00000446594 718 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 SLC25A18P1-201ENST00000449385 454 ntBASIC4.74□□□□□ -1.65
PDX1P52945 RPL23AP56-201ENST00000460778 453 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC010326.1-201ENST00000462726 602 ntBASIC4.74□□□□□ -1.65
PDX1P52945 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 AC037198.2-201ENST00000478845 733 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 AC116562.1-201ENST00000485355 781 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 OR5M2P-201ENST00000529003 936 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC068339.2-201ENST00000534395 618 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC068993.1-201ENST00000546724 589 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC025918.2-201ENST00000558683 763 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.74□□□□□ -1.65
PDX1P52945 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.74□□□□□ -1.65
PDX1P52945 RPL26P30-202ENST00000602923 645 ntBASIC4.74□□□□□ -1.65
PDX1P52945 Z95327.3-201ENST00000610385 572 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AC021106.3-201ENST00000623925 531 ntBASIC4.74□□□□□ -1.65
PDX1P52945 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDX1P52945 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.74□□□□□ -1.65
PDX1P52945 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PDX1P52945 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDX1P52945 SMG1P4-204ENST00000523028 4131 ntBASIC4.74□□□□□ -1.65
PDX1P52945 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.73□□□□□ -1.65
PDX1P52945 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 UGT2B26P-201ENST00000508672 1613 ntBASIC4.73□□□□□ -1.65
PDX1P52945 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 RNU6-244P-201ENST00000391028 104 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AL035405.1-201ENST00000400795 710 ntBASIC4.73□□□□□ -1.65
PDX1P52945 RPS3AP23-201ENST00000401762 784 ntBASIC4.73□□□□□ -1.65
PDX1P52945 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.73□□□□□ -1.65
PDX1P52945 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 RNU4-74P-201ENST00000411280 161 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 AC010385.1-201ENST00000412374 256 ntBASIC4.73□□□□□ -1.65
PDX1P52945 RSU1P3-201ENST00000412878 835 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AL158825.1-201ENST00000414735 521 ntBASIC4.73□□□□□ -1.65
PDX1P52945 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.73□□□□□ -1.65
PDX1P52945 HSPE1P16-201ENST00000426640 348 ntBASIC4.73□□□□□ -1.65
PDX1P52945 COX6CP13-201ENST00000428703 226 ntBASIC4.73□□□□□ -1.65
PDX1P52945 OR2B7P-201ENST00000429302 934 ntBASIC4.73□□□□□ -1.65
PDX1P52945 NRBF2P3-201ENST00000432731 865 ntBASIC4.73□□□□□ -1.65
PDX1P52945 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 MOB1AP2-201ENST00000446060 614 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.73□□□□□ -1.65
PDX1P52945 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.73□□□□□ -1.65
PDX1P52945 AC026979.1-201ENST00000492525 396 ntBASIC4.73□□□□□ -1.65
PDX1P52945 NAMPTP2-201ENST00000505629 1115 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 C1DP5-201ENST00000525775 383 ntBASIC4.73□□□□□ -1.65
PDX1P52945 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.73□□□□□ -1.65
PDX1P52945 TVP23CP2-201ENST00000571473 623 ntBASIC4.73□□□□□ -1.65
PDX1P52945 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.73□□□□□ -1.65
PDX1P52945 AC079880.2-201ENST00000603790 1213 ntBASIC4.73□□□□□ -1.65
PDX1P52945 AC098935.2-201ENST00000604222 466 ntBASIC4.73□□□□□ -1.65
PDX1P52945 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.73□□□□□ -1.65
PDX1P52945 AL391834.1-201ENST00000609609 560 ntBASIC4.73□□□□□ -1.65
PDX1P52945 MIR6853-201ENST00000619642 74 ntBASIC4.73□□□□□ -1.65
PDX1P52945 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.73□□□□□ -1.65
PDX1P52945 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PDX1P52945 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PDX1P52945 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.73□□□□□ -1.65
PDX1P52945 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms