Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
NEK3P51956 AL079342.2-201ENST00000403367 482 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RNU6-272P-201ENST00000411028 104 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPSAP35-201ENST00000413753 818 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AL449283.1-202ENST00000418249 604 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPL12P28-201ENST00000430852 489 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 AC023347.2-201ENST00000433994 462 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPS20P1-201ENST00000434853 354 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPL12P18-201ENST00000437175 325 ntBASIC5.56□□□□□ -1.52
NEK3P51956 CYCSP12-201ENST00000437729 300 ntBASIC5.56□□□□□ -1.52
NEK3P51956 OR10R1P-201ENST00000441524 1141 ntBASIC5.56□□□□□ -1.52
NEK3P51956 IGBP1P3-201ENST00000447449 1000 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPS27AP15-201ENST00000447672 466 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC090804.1-201ENST00000448870 490 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC233982.1-201ENST00000451247 436 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.56□□□□□ -1.52
NEK3P51956 CCDC75P1-201ENST00000469247 791 ntBASIC5.56□□□□□ -1.52
NEK3P51956 COPS8P2-201ENST00000473228 627 ntBASIC5.56□□□□□ -1.52
NEK3P51956 RPS27P23-201ENST00000487608 251 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 IGLV2-28-201ENST00000520681 304 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.56□□□□□ -1.52
NEK3P51956 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.56□□□□□ -1.52
NEK3P51956 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.56□□□□□ -1.52
NEK3P51956 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 AC108738.1-201ENST00000603703 237 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AL583856.2-201ENST00000606298 543 ntBASIC5.56□□□□□ -1.52
NEK3P51956 AP000238.1-201ENST00000608759 426 ntBASIC5.56□□□□□ -1.52
NEK3P51956 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.56□□□□□ -1.52
NEK3P51956 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 AC087821.2-201ENST00000637086 450 ntBASIC5.56□□□□□ -1.52
NEK3P51956 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.56□□□□□ -1.52
NEK3P51956 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 AL603750.1-201ENST00000624216 1717 ntBASIC5.56□□□□□ -1.52
NEK3P51956 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.56□□□□□ -1.52
NEK3P51956 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NEK3P51956 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 AL355852.1-201ENST00000454081 1771 ntBASIC5.55□□□□□ -1.52
NEK3P51956 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 ADAM5-202ENST00000399789 1942 ntBASIC5.55□□□□□ -1.52
NEK3P51956 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NEK3P51956 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 OR1L1-202ENST00000373686 1083 ntBASIC5.55□□□□□ -1.52
NEK3P51956 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 HNRNPDP2-201ENST00000406475 478 ntBASIC5.55□□□□□ -1.52
NEK3P51956 MIR1286-201ENST00000408112 78 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 AL358176.3-201ENST00000420757 454 ntBASIC5.55□□□□□ -1.52
NEK3P51956 USP12PY-201ENST00000427677 1064 ntBASIC5.55□□□□□ -1.52
NEK3P51956 CNOT7P1-201ENST00000429006 852 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 CYCSP6-201ENST00000434498 302 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 AL163193.1-201ENST00000444895 788 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL009048.1-201ENST00000450437 298 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 AC026348.1-201ENST00000462549 1053 ntBASIC5.55□□□□□ -1.52
NEK3P51956 RPL21P71-201ENST00000465598 459 ntBASIC5.55□□□□□ -1.52
NEK3P51956 RPL7P39-201ENST00000481157 744 ntBASIC5.55□□□□□ -1.52
NEK3P51956 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 RN7SKP96-201ENST00000516948 297 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AC023632.1-201ENST00000518463 375 ntBASIC5.55□□□□□ -1.52
NEK3P51956 HIGD1AP6-201ENST00000521833 279 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AC107918.3-201ENST00000533272 382 ntBASIC5.55□□□□□ -1.52
NEK3P51956 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.55□□□□□ -1.52
NEK3P51956 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 MTND1P24-201ENST00000552175 861 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.55□□□□□ -1.52
NEK3P51956 AC127381.1-201ENST00000555979 939 ntBASIC5.55□□□□□ -1.52
NEK3P51956 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NEK3P51956 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.55□□□□□ -1.52
NEK3P51956 AP001160.4-201ENST00000596971 382 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.55□□□□□ -1.52
NEK3P51956 AC106052.1-201ENST00000608029 497 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AC000068.2-201ENST00000608816 460 ntBASIC5.55□□□□□ -1.52
NEK3P51956 AL592148.2-201ENST00000612210 372 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms