Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP4P49662 AL137100.1-201ENST00000556703 1620 ntBASIC4.84□□□□□ -1.63
CASP4P49662 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CASP4P49662 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC008033.1-201ENST00000216407 1162 ntBASIC4.84□□□□□ -1.63
CASP4P49662 RNU1-44P-201ENST00000384453 163 ntBASIC4.84□□□□□ -1.63
CASP4P49662 MIR129-1-201ENST00000384972 72 ntBASIC4.84□□□□□ -1.63
CASP4P49662 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CASP4P49662 SNORA68.2-201ENST00000391263 128 ntBASIC4.84□□□□□ -1.63
CASP4P49662 RPL23AP59-201ENST00000399415 461 ntBASIC4.84□□□□□ -1.63
CASP4P49662 RPL37P18-201ENST00000411602 243 ntBASIC4.84□□□□□ -1.63
CASP4P49662 RPS20P14-201ENST00000412545 360 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP4P49662 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.84□□□□□ -1.63
CASP4P49662 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP4P49662 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP4P49662 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP4P49662 OR7L1P-201ENST00000456181 380 ntBASIC4.84□□□□□ -1.63
CASP4P49662 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP4P49662 RN7SL738P-201ENST00000470264 297 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AK3P4-201ENST00000504283 583 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP4P49662 AC090151.1-201ENST00000520784 730 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC068831.4-201ENST00000556118 109 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP4P49662 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.84□□□□□ -1.63
CASP4P49662 AC020915.5-201ENST00000596836 964 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC234771.5-201ENST00000600161 514 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC068790.4-201ENST00000602474 263 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC026979.4-201ENST00000606555 645 ntBASIC4.84□□□□□ -1.63
CASP4P49662 Z98200.1-201ENST00000607298 470 ntBASIC4.84□□□□□ -1.63
CASP4P49662 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.84□□□□□ -1.63
CASP4P49662 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CASP4P49662 AC007546.2-201ENST00000623996 360 ntBASIC4.84□□□□□ -1.63
CASP4P49662 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASP4P49662 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CASP4P49662 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CASP4P49662 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CASP4P49662 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.84□□□□□ -1.64
CASP4P49662 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CASP4P49662 OR51H2P-202ENST00000641424 3046 ntBASIC4.83□□□□□ -1.64
CASP4P49662 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 AC120338.1-201ENST00000625074 1541 ntBASIC4.83□□□□□ -1.64
CASP4P49662 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
CASP4P49662 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP4P49662 RNA5SP307-201ENST00000362863 116 ntBASIC4.83□□□□□ -1.64
CASP4P49662 RN7SKP224-201ENST00000364140 325 ntBASIC4.83□□□□□ -1.64
CASP4P49662 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP4P49662 CASKP1-201ENST00000412870 582 ntBASIC4.83□□□□□ -1.64
CASP4P49662 TMSB10P2-201ENST00000416049 131 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.83□□□□□ -1.64
CASP4P49662 RPL23AP25-201ENST00000430973 463 ntBASIC4.83□□□□□ -1.64
CASP4P49662 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AL162591.2-201ENST00000449634 317 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP4P49662 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
CASP4P49662 AC053481.1-201ENST00000467217 306 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AC092905.1-201ENST00000467527 949 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AC096741.1-201ENST00000472250 846 ntBASIC4.83□□□□□ -1.64
CASP4P49662 RPL23AP65-201ENST00000475608 468 ntBASIC4.83□□□□□ -1.64
CASP4P49662 RPL21P6-201ENST00000479171 504 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP4P49662 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.83□□□□□ -1.64
CASP4P49662 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP4P49662 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.83□□□□□ -1.64
CASP4P49662 MTND2P13-201ENST00000577438 1039 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AP005119.2-201ENST00000579735 1105 ntBASIC4.83□□□□□ -1.64
CASP4P49662 MIR4715-201ENST00000584117 79 ntBASIC4.83□□□□□ -1.64
CASP4P49662 AC012409.3-201ENST00000611343 981 ntBASIC4.83□□□□□ -1.64
CASP4P49662 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
CASP4P49662 AC139713.2-215ENST00000641428 5037 ntBASIC4.83□□□□□ -1.64
CASP4P49662 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.83□□□□□ -1.64
CASP4P49662 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.83□□□□□ -1.64
CASP4P49662 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CASP4P49662 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
CASP4P49662 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CASP4P49662 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CASP4P49662 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CASP4P49662 SNORA74C-2-201ENST00000411179 201 ntBASIC4.82□□□□□ -1.64
CASP4P49662 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.82□□□□□ -1.64
CASP4P49662 CEACAMP8-201ENST00000413902 580 ntBASIC4.82□□□□□ -1.64
CASP4P49662 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.82□□□□□ -1.64
CASP4P49662 NDUFA5P1-201ENST00000433858 341 ntBASIC4.82□□□□□ -1.64
CASP4P49662 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CASP4P49662 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.82□□□□□ -1.64
CASP4P49662 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.82□□□□□ -1.64
CASP4P49662 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CASP4P49662 NPM1P39-201ENST00000449818 867 ntBASIC4.82□□□□□ -1.64
CASP4P49662 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.82□□□□□ -1.64
CASP4P49662 AC005008.1-201ENST00000456151 612 ntBASIC4.82□□□□□ -1.64
CASP4P49662 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.82□□□□□ -1.64
CASP4P49662 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CASP4P49662 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.82□□□□□ -1.64
CASP4P49662 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.82□□□□□ -1.64
CASP4P49662 AC021146.3-201ENST00000511911 260 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms