Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 OR2AF1P-201ENST00000454899 889 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CR1P49238 RN7SL808P-201ENST00000496066 299 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AC091917.2-201ENST00000505002 744 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AC098799.3-201ENST00000506095 438 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CR1P49238 RARSP1-201ENST00000542842 1418 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CX3CR1P49238 EDDM3DP-201ENST00000554692 434 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CR1P49238 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CR1P49238 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CR1P49238 SLC25A36P1-201ENST00000590111 465 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CR1P49238 AL445222.1-201ENST00000607259 628 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AL391834.1-201ENST00000609609 560 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AP001002.1-201ENST00000625148 1513 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 AC119674.1-212ENST00000641155 993 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 MAPK10-304ENST00000641341 3984 ntBASIC4.08□□□□□ -1.76
CX3CR1P49238 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CR1P49238 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AC017104.4-201ENST00000636283 1592 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CR1P49238 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CR1P49238 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 RNU6-146P-201ENST00000384602 108 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 MIR92A2-201ENST00000385299 75 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 GSTA12P-201ENST00000402398 508 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC092570.3-201ENST00000420113 693 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 RPL12P34-201ENST00000424532 479 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AL357520.1-201ENST00000441557 453 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AL645937.3-201ENST00000453647 936 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 PPIAP21-201ENST00000464473 501 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC074386.1-201ENST00000476560 767 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC005912.1-201ENST00000495392 255 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 SCARNA22-201ENST00000503991 125 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AC021146.7-201ENST00000509604 775 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 OR5AZ1P-201ENST00000527448 943 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AP001880.2-201ENST00000538233 448 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC068446.3-201ENST00000555285 382 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 NPM1P47-201ENST00000560843 856 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 BGLT3-201ENST00000564523 994 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AL391358.1-201ENST00000605342 190 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 AP003497.2-201ENST00000624220 967 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CR1P49238 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CR1P49238 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CR1P49238 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CR1P49238 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
CX3CR1P49238 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 AC114546.3-201ENST00000623582 1734 ntBASIC4.07□□□□□ -1.76
CX3CR1P49238 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CR1P49238 LINC01109-201ENST00000603837 3081 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AL445437.1-201ENST00000623157 3087 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 CASC19-204ENST00000641001 2055 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AC009229.4-201ENST00000623854 1947 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CX3CR1P49238 RNA5SP191-201ENST00000362585 102 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AL121834.1-202ENST00000404494 277 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 RN7SKP267-201ENST00000410381 285 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC004690.1-201ENST00000418216 328 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC019050.1-201ENST00000418508 492 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 RPS26P13-201ENST00000419030 330 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 RPL21P43-201ENST00000425440 472 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 215.8 ms