Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 HMGB3P26-201ENST00000560051 582 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC018552.3-201ENST00000567416 561 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC138473.1-201ENST00000605717 526 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC012213.4-201ENST00000606457 354 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AL049539.1-201ENST00000611964 459 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 AL023881.1-201ENST00000621088 301 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 U3.53-201ENST00000628922 216 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.11□□□□□ -1.75
CSNK1A1P48729 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 ZNF137P-201ENST00000456718 1920 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.11□□□□□ -1.75
CSNK1A1P48729 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CSNK1A1P48729 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AL391684.1-202ENST00000641293 1636 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 SNORA58B-201ENST00000364259 136 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 MT-TP-201ENST00000387461 68 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 TRIM60P17-201ENST00000415181 719 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 RPL21P43-201ENST00000425440 472 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AL360081.1-201ENST00000428299 555 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 RPS20P1-201ENST00000434853 354 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 RPL12P46-201ENST00000436610 195 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC092013.1-201ENST00000438795 332 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 ELOCP10-201ENST00000440624 327 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 ARL4AP3-201ENST00000441452 574 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 Z80107.2-201ENST00000445127 392 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 CCRL1P1-201ENST00000449542 1053 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC108463.1-201ENST00000450258 347 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AL935212.3-201ENST00000450729 284 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 IGKV1-32-201ENST00000519290 311 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC008676.3-201ENST00000521237 435 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC008147.3-201ENST00000548666 354 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 ELOCP34-201ENST00000604436 327 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AL353600.1-201ENST00000608148 251 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC116447.1-201ENST00000613153 453 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 AC091953.3-201ENST00000623220 236 ntBASIC4.1□□□□□ -1.75
CSNK1A1P48729 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CSNK1A1P48729 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CSNK1A1P48729 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1A1P48729 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1A1P48729 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CSNK1A1P48729 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 AL035419.1-201ENST00000397037 564 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AL133270.1-201ENST00000402635 279 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 GAPDHP49-201ENST00000421421 961 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 Z74021.1-201ENST00000423610 407 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 IPMKP1-201ENST00000425988 855 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AL392003.1-201ENST00000434394 243 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC006466.1-201ENST00000438721 289 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AL772161.1-201ENST00000439130 476 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC021146.3-201ENST00000511911 260 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC068446.3-201ENST00000555285 382 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.09□□□□□ -1.75
CSNK1A1P48729 MIR4270-201ENST00000581799 70 ntBASIC4.09□□□□□ -1.75
CSNK1A1P48729 AC091178.1-203ENST00000584586 279 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms