Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC024341.1-201ENST00000526444 1552 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 VN2R3P-201ENST00000422626 1412 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HNF4AP41235 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HNF4AP41235 SNURFL-201ENST00000309296 343 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 OR52B1P-201ENST00000316506 909 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 RNU6-984P-201ENST00000363236 109 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 SNORA70.10-201ENST00000384515 134 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 AC013442.1-201ENST00000397347 228 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 HMGB1P13-201ENST00000406019 642 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 RNU4-34P-201ENST00000410431 124 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 MTCO3P4-201ENST00000419236 787 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 RPL30P3-201ENST00000424262 333 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 OR2AH1P-201ENST00000425717 928 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AL390879.2-203ENST00000426943 1121 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.84□□□□□ -1.63
HNF4AP41235 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 AL353093.1-201ENST00000441292 436 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 snoU13.20-201ENST00000459180 104 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 GYG1P1-201ENST00000460864 698 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 BX284632.1-201ENST00000478218 541 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 RPSAP50-201ENST00000481955 852 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 RN7SL727P-201ENST00000482164 296 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC147055.3-201ENST00000510547 851 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC022790.1-201ENST00000522872 204 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 OR8K2P-201ENST00000524645 927 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 OR5AN2P-201ENST00000534535 896 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC092490.3-201ENST00000545370 572 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 POLR2KP1-201ENST00000553226 168 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 MTND4LP24-201ENST00000572277 291 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC006116.3-201ENST00000592968 361 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.84□□□□□ -1.63
HNF4AP41235 AC010857.1-201ENST00000606398 594 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC144521.1-201ENST00000607148 956 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC009163.6-201ENST00000612367 342 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 AC011815.3-201ENST00000624194 473 ntBASIC4.84□□□□□ -1.63
HNF4AP41235 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.84□□□□□ -1.63
HNF4AP41235 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HNF4AP41235 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.84□□□□□ -1.63
HNF4AP41235 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.84□□□□□ -1.64
HNF4AP41235 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.84□□□□□ -1.64
HNF4AP41235 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HNF4AP41235 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.83□□□□□ -1.64
HNF4AP41235 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.83□□□□□ -1.64
HNF4AP41235 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC007529.1-201ENST00000418574 2178 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HNF4AP41235 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HNF4AP41235 SNORA73.1-201ENST00000363107 205 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.83□□□□□ -1.64
HNF4AP41235 SNORA66-201ENST00000384792 133 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HNF4AP41235 AC005522.1-201ENST00000395416 346 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 HMGB1P10-201ENST00000395823 563 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 TAF9BP2-201ENST00000400856 499 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.83□□□□□ -1.64
HNF4AP41235 AC093162.1-201ENST00000419682 124 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.83□□□□□ -1.64
HNF4AP41235 RPL34P20-201ENST00000442771 351 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC092647.3-201ENST00000443044 633 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 OR7E125P-201ENST00000443450 846 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 BTF3P6-201ENST00000448054 499 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AL645937.3-201ENST00000453647 936 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AL356981.1-201ENST00000454879 684 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 CYCSP53-201ENST00000455540 265 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 RPS20P4-201ENST00000461659 355 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 CABYRP1-201ENST00000465493 1045 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 RN7SL808P-201ENST00000496066 299 ntBASIC4.83□□□□□ -1.64
HNF4AP41235 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms