Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 SULT1C2P2-201ENST00000562517 294 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.58□□□□□ -1.68
HMGCLP35914 AL021368.1-201ENST00000607490 540 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AC004948.1-201ENST00000609858 672 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AL354696.1-201ENST00000614652 497 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCLP35914 AC003001.2-201ENST00000616294 831 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AC079298.2-201ENST00000623885 459 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AC021106.3-201ENST00000623925 531 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 AL118508.4-201ENST00000624142 1176 ntBASIC4.58□□□□□ -1.68
HMGCLP35914 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCLP35914 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMGCLP35914 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCLP35914 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HMGCLP35914 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCLP35914 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCLP35914 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCLP35914 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HMGCLP35914 MIR937-201ENST00000401271 86 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 AC019050.1-201ENST00000418508 492 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.57□□□□□ -1.68
HMGCLP35914 AC017099.1-201ENST00000448261 1028 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 AL513343.1-201ENST00000451818 792 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCLP35914 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCLP35914 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCLP35914 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.57□□□□□ -1.68
HMGCLP35914 SNORD91B-202ENST00000608459 222 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 AL159169.2-201ENST00000610061 1269 ntBASIC4.57□□□□□ -1.68
HMGCLP35914 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.57□□□□□ -1.68
HMGCLP35914 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HMGCLP35914 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HMGCLP35914 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 AC012618.3-205ENST00000637896 1496 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC073429.2-201ENST00000569694 1444 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 RNU1-94P-201ENST00000362627 173 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 MIR7-1-201ENST00000384871 110 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC009302.1-201ENST00000417147 390 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGCLP35914 RAD23BP1-201ENST00000421404 1227 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AC007064.3-201ENST00000422608 359 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AJ239321.1-201ENST00000424255 564 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 RPL21P91-201ENST00000429231 479 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AL138878.2-201ENST00000440581 1241 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 RPS29P22-201ENST00000472363 168 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 RPL23AP37-201ENST00000479658 549 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 RNA5SP446-201ENST00000515955 82 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 AP000827.1-201ENST00000527814 258 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.56□□□□□ -1.68
HMGCLP35914 SNRPGP1-201ENST00000553864 222 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 ADAD1P2-201ENST00000588476 646 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 KATNBL1P1-201ENST00000605192 748 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.56□□□□□ -1.68
HMGCLP35914 AC023813.4-201ENST00000607580 580 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AC015908.5-201ENST00000623289 343 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 AC073592.7-201ENST00000623659 507 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
HMGCLP35914 AL139254.3-201ENST00000641097 674 ntBASIC4.56□□□□□ -1.68
HMGCLP35914 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HMGCLP35914 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HMGCLP35914 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.56□□□□□ -1.68
HMGCLP35914 MFSD8-216ENST00000641147 4009 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms