Protein–RNA interactions for Protein: P35548

MSX2, Homeobox protein MSX-2, humanhuman

Predicted RBP Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2P35548 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
MSX2P35548 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.48□□□□□ -1.53
MSX2P35548 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 NACAP5-201ENST00000509863 636 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MSX2P35548 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.48□□□□□ -1.53
MSX2P35548 AP004609.2-201ENST00000532177 190 ntBASIC5.48□□□□□ -1.53
MSX2P35548 YWHABP2-201ENST00000540201 713 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 SERPINE4P-201ENST00000554978 281 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AL049870.4-201ENST00000555741 486 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC044913.1-201ENST00000557200 430 ntBASIC5.48□□□□□ -1.53
MSX2P35548 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.48□□□□□ -1.53
MSX2P35548 MIR548S-201ENST00000581352 82 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.48□□□□□ -1.53
MSX2P35548 AC008507.1-201ENST00000587506 734 ntBASIC5.48□□□□□ -1.53
MSX2P35548 OR4G1P-201ENST00000588632 938 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC083760.1-201ENST00000589621 670 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC036176.3-201ENST00000602456 418 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.48□□□□□ -1.53
MSX2P35548 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AL592221.1-201ENST00000605266 382 ntBASIC5.48□□□□□ -1.53
MSX2P35548 NDUFA8P1-201ENST00000605525 367 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AP000238.1-201ENST00000608759 426 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC099676.1-201ENST00000608886 657 ntBASIC5.48□□□□□ -1.53
MSX2P35548 MIR6885-201ENST00000612241 66 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC025594.3-201ENST00000613068 790 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC016769.4-201ENST00000616893 535 ntBASIC5.48□□□□□ -1.53
MSX2P35548 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 AL122023.1-201ENST00000622847 530 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.48□□□□□ -1.53
MSX2P35548 AC087821.2-201ENST00000637086 450 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSX2P35548 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
MSX2P35548 AC087565.3-203ENST00000641018 837 ntBASIC5.48□□□□□ -1.53
MSX2P35548 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
MSX2P35548 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 AC068870.3-201ENST00000625077 2536 ntBASIC5.48□□□□□ -1.53
MSX2P35548 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
MSX2P35548 AL034549.2-201ENST00000618285 3373 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MSX2P35548 MTND4P31-201ENST00000425607 1343 ntBASIC5.48□□□□□ -1.53
MSX2P35548 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
MSX2P35548 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSX2P35548 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.47□□□□□ -1.53
MSX2P35548 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSX2P35548 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSX2P35548 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.47□□□□□ -1.53
MSX2P35548 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
MSX2P35548 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
MSX2P35548 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
MSX2P35548 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.47□□□□□ -1.53
MSX2P35548 AL121657.1-201ENST00000327215 531 ntBASIC5.47□□□□□ -1.53
MSX2P35548 MIR1266-201ENST00000408125 84 ntBASIC5.47□□□□□ -1.53
MSX2P35548 SNORA11.3-201ENST00000408471 128 ntBASIC5.47□□□□□ -1.53
MSX2P35548 RNU2-66P-201ENST00000410650 161 ntBASIC5.47□□□□□ -1.53
MSX2P35548 TPMTP3-201ENST00000411928 735 ntBASIC5.47□□□□□ -1.53
MSX2P35548 RPS27AP7-201ENST00000422792 455 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.47□□□□□ -1.53
MSX2P35548 AL596276.1-201ENST00000434465 418 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AC128677.1-201ENST00000436016 442 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC241584.1-201ENST00000438469 1241 ntBASIC5.47□□□□□ -1.53
MSX2P35548 MTND1P30-201ENST00000441241 901 ntBASIC5.47□□□□□ -1.53
MSX2P35548 TRIM60P18-201ENST00000441518 828 ntBASIC5.47□□□□□ -1.53
MSX2P35548 FTLP8-201ENST00000446770 267 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.47□□□□□ -1.53
MSX2P35548 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.47□□□□□ -1.53
MSX2P35548 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC138853.1-201ENST00000503549 823 ntBASIC5.47□□□□□ -1.53
MSX2P35548 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.47□□□□□ -1.53
MSX2P35548 AC079395.1-201ENST00000510981 262 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AC108120.2-201ENST00000512973 294 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.47□□□□□ -1.53
MSX2P35548 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.47□□□□□ -1.53
MSX2P35548 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
MSX2P35548 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC009962.1-201ENST00000567327 3813 ntBASIC5.47□□□□□ -1.53
MSX2P35548 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.47□□□□□ -1.53
MSX2P35548 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.47□□□□□ -1.53
MSX2P35548 AC083899.3-201ENST00000603413 594 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AL353621.2-201ENST00000605340 133 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AC007684.1-201ENST00000609671 477 ntBASIC5.47□□□□□ -1.53
MSX2P35548 AL021918.2-201ENST00000613415 194 ntBASIC5.47□□□□□ -1.53
MSX2P35548 SNORA11.6-201ENST00000619030 128 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms