Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN4AP35499 RNU1-14P-201ENST00000362759 152 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 MFSD13B-201ENST00000420133 1290 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 EIF4A1P1-201ENST00000420241 934 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN4AP35499 RPS27AP17-201ENST00000463344 455 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 AC022336.1-201ENST00000475510 337 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN4AP35499 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.25□□□□□ -1.57
SCN4AP35499 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN4AP35499 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN4AP35499 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN4AP35499 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN4AP35499 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 AC000374.1-201ENST00000434698 1745 ntBASIC5.25□□□□□ -1.57
SCN4AP35499 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN4AP35499 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4AP35499 AC100778.3-201ENST00000580060 1750 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4AP35499 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN4AP35499 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SCN4AP35499 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4AP35499 RNA5SP246-201ENST00000458909 119 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 RPL7P49-201ENST00000471402 708 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN4AP35499 KCTD9P2-201ENST00000512203 1013 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 DUXAP2-201ENST00000519198 589 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4AP35499 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4AP35499 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 AP000648.2-201ENST00000624182 404 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 AP001642.1-201ENST00000624727 2117 ntBASIC5.24□□□□□ -1.57
SCN4AP35499 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4AP35499 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4AP35499 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
SCN4AP35499 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN4AP35499 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4AP35499 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4AP35499 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4AP35499 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
SCN4AP35499 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4AP35499 RN7SKP97-201ENST00000410966 333 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC012671.1-201ENST00000451912 203 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC010374.1-201ENST00000503762 1237 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC010460.1-201ENST00000507087 466 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 IFITM8P-201ENST00000522529 394 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 DYNLL1P4-201ENST00000549314 266 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC015912.2-201ENST00000571053 181 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC012468.1-201ENST00000604888 430 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC018816.2-201ENST00000621460 353 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC020978.9-201ENST00000624380 1141 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 AL136164.3-201ENST00000624429 3978 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4AP35499 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4AP35499 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4AP35499 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 AP001284.1-201ENST00000528393 2118 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 GTF3AP5-201ENST00000442645 697 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 AL157884.3-201ENST00000448273 1184 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 AL592156.1-201ENST00000508758 304 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 RNA5SP519-201ENST00000516480 119 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 PAICSP4-201ENST00000517543 1253 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4AP35499 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4AP35499 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 MIR5685-201ENST00000579080 79 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 AL161729.3-201ENST00000603533 673 ntBASIC5.23□□□□□ -1.57
SCN4AP35499 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4AP35499 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4AP35499 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.22□□□□□ -1.57
SCN4AP35499 AC233968.1-201ENST00000611212 1300 ntBASIC5.22□□□□□ -1.57
SCN4AP35499 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.22□□□□□ -1.57
SCN4AP35499 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms