Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 GSTM5P1-201ENST00000434751 660 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 NANOGP9-201ENST00000439890 892 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXD12P35452 AL591719.1-201ENST00000444669 744 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC069540.1-201ENST00000446320 988 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 MTND6P6-201ENST00000478031 263 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC083982.1-201ENST00000485679 344 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 RPS4XP20-201ENST00000505751 772 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 ENPP7P11-201ENST00000505915 627 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC078899.1-201ENST00000521432 1185 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXD12P35452 OR11J2P-201ENST00000555298 907 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXD12P35452 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXD12P35452 AC022022.2-201ENST00000602989 360 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.38□□□□□ -1.55
HOXD12P35452 ELOCP35-201ENST00000604289 336 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 Z82195.1-201ENST00000604558 398 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC073387.2-201ENST00000604797 784 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 FAM25E-202ENST00000608562 189 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC099494.2-201ENST00000623371 978 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC068057.2-201ENST00000624047 895 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 AC015726.3-201ENST00000624501 418 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.38□□□□□ -1.55
HOXD12P35452 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
HOXD12P35452 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXD12P35452 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXD12P35452 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 IGKV7-3-201ENST00000357453 298 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 MIR142-201ENST00000384835 87 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 RNA5SP91-201ENST00000390902 119 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 RPS4XP9-201ENST00000405151 780 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 AL807761.1-201ENST00000417622 171 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 MTND2P16-201ENST00000419987 799 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC245028.1-201ENST00000423259 256 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 XKRYP1-201ENST00000423438 492 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 RBMY2QP-201ENST00000429799 1147 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 RPL34P6-201ENST00000432390 345 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 XKRYP2-201ENST00000432915 492 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 CBX1P4-201ENST00000439415 457 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 MTATP6P26-201ENST00000445926 662 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC008280.2-201ENST00000455473 307 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 Z92846.1-201ENST00000456203 268 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 SNORD11.1-201ENST00000459482 85 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 MTCO2P6-201ENST00000463134 685 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC090114.3-201ENST00000479267 829 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC104687.1-201ENST00000485829 412 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD12P35452 BOLA3P3-201ENST00000505182 232 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 TOMM22P4-201ENST00000511318 336 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 snoU109.5-201ENST00000516231 132 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 RN7SKP147-201ENST00000517154 244 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD12P35452 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC090888.2-201ENST00000559765 1144 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD12P35452 AL513327.3-201ENST00000602618 469 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC025811.1-201ENST00000604312 472 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC079395.3-201ENST00000615161 484 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC022079.2-201ENST00000619739 566 ntBASIC5.37□□□□□ -1.55
HOXD12P35452 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD12P35452 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms