Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 AC015849.6-201ENST00000605454 474 ntBASIC5.63□□□□□ -1.51
RFC4P35249 AC015804.1-201ENST00000622935 435 ntBASIC5.63□□□□□ -1.51
RFC4P35249 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC4P35249 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC4P35249 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC4P35249 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
RFC4P35249 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.62□□□□□ -1.51
RFC4P35249 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 RNA5SP513-201ENST00000364648 118 ntBASIC5.62□□□□□ -1.51
RFC4P35249 AC007738.1-201ENST00000413892 348 ntBASIC5.62□□□□□ -1.51
RFC4P35249 TRGV7-201ENST00000427089 353 ntBASIC5.62□□□□□ -1.51
RFC4P35249 AL358232.1-201ENST00000448030 501 ntBASIC5.62□□□□□ -1.51
RFC4P35249 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC4P35249 AC108064.1-201ENST00000513791 460 ntBASIC5.62□□□□□ -1.51
RFC4P35249 RN7SL600P-201ENST00000581811 299 ntBASIC5.62□□□□□ -1.51
RFC4P35249 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC4P35249 AC079587.1-201ENST00000603846 277 ntBASIC5.62□□□□□ -1.51
RFC4P35249 AC112200.1-201ENST00000625015 234 ntBASIC5.62□□□□□ -1.51
RFC4P35249 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC4P35249 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC4P35249 AC097461.1-201ENST00000568928 2821 ntBASIC5.62□□□□□ -1.51
RFC4P35249 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RFC4P35249 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.62□□□□□ -1.51
RFC4P35249 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC4P35249 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
RFC4P35249 AL031595.2-201ENST00000624215 19071 ntBASIC5.62□□□□□ -1.51
RFC4P35249 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RFC4P35249 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC4P35249 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 SETP10-201ENST00000424368 814 ntBASIC5.61□□□□□ -1.51
RFC4P35249 RPL12P18-201ENST00000437175 325 ntBASIC5.61□□□□□ -1.51
RFC4P35249 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 RPL21P89-201ENST00000444021 467 ntBASIC5.61□□□□□ -1.51
RFC4P35249 AC079804.1-201ENST00000461922 436 ntBASIC5.61□□□□□ -1.51
RFC4P35249 AC098583.1-201ENST00000480875 255 ntBASIC5.61□□□□□ -1.51
RFC4P35249 RPS27AP13-201ENST00000498403 237 ntBASIC5.61□□□□□ -1.51
RFC4P35249 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC4P35249 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC4P35249 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.61□□□□□ -1.51
RFC4P35249 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC4P35249 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.61□□□□□ -1.51
RFC4P35249 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.61□□□□□ -1.51
RFC4P35249 CYCSP40-201ENST00000575927 294 ntBASIC5.61□□□□□ -1.51
RFC4P35249 ADAD1P2-201ENST00000588476 646 ntBASIC5.61□□□□□ -1.51
RFC4P35249 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.61□□□□□ -1.51
RFC4P35249 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFC4P35249 AC008079.2-201ENST00000623543 20396 ntBASIC5.6□□□□□ -1.51
RFC4P35249 AC027228.2-201ENST00000567141 2154 ntBASIC5.6□□□□□ -1.51
RFC4P35249 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC4P35249 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 SAMMSON-213ENST00000641336 1521 ntBASIC5.6□□□□□ -1.51
RFC4P35249 AC073136.1-201ENST00000449426 2884 ntBASIC5.6□□□□□ -1.51
RFC4P35249 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 AC008549.2-201ENST00000333482 706 ntBASIC5.6□□□□□ -1.51
RFC4P35249 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RFC4P35249 EI24P3-201ENST00000399046 1062 ntBASIC5.6□□□□□ -1.51
RFC4P35249 RN7SKP159-201ENST00000410657 292 ntBASIC5.6□□□□□ -1.51
RFC4P35249 RNU6-233P-201ENST00000410845 141 ntBASIC5.6□□□□□ -1.51
RFC4P35249 CYCSP19-201ENST00000411715 316 ntBASIC5.6□□□□□ -1.51
RFC4P35249 EIF4HP2-201ENST00000424380 563 ntBASIC5.6□□□□□ -1.51
RFC4P35249 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC4P35249 AL162151.2-201ENST00000448875 158 ntBASIC5.6□□□□□ -1.51
RFC4P35249 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RFC4P35249 AC021660.1-201ENST00000465006 554 ntBASIC5.6□□□□□ -1.51
RFC4P35249 AL133372.1-201ENST00000493565 745 ntBASIC5.6□□□□□ -1.51
RFC4P35249 RN7SL691P-201ENST00000494487 301 ntBASIC5.6□□□□□ -1.51
RFC4P35249 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.6□□□□□ -1.51
RFC4P35249 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC4P35249 RNA5SP49-201ENST00000516450 115 ntBASIC5.6□□□□□ -1.51
RFC4P35249 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC4P35249 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC4P35249 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.6□□□□□ -1.51
RFC4P35249 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.6□□□□□ -1.51
RFC4P35249 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 MIR6875-201ENST00000617506 72 ntBASIC5.6□□□□□ -1.51
RFC4P35249 MIR6891-201ENST00000618788 93 ntBASIC5.6□□□□□ -1.51
RFC4P35249 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RFC4P35249 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RFC4P35249 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms