Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
RPA3P35244 MTND4P26-201ENST00000415971 1359 ntBASIC4.43□□□□□ -1.7
RPA3P35244 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPA3P35244 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RPA3P35244 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RPA3P35244 RNA5SP397-201ENST00000391323 118 ntBASIC4.43□□□□□ -1.7
RPA3P35244 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RPA3P35244 AL590139.1-201ENST00000416267 400 ntBASIC4.43□□□□□ -1.7
RPA3P35244 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 RPSAP41-201ENST00000439695 860 ntBASIC4.43□□□□□ -1.7
RPA3P35244 ARL2BPP10-201ENST00000446487 531 ntBASIC4.43□□□□□ -1.7
RPA3P35244 ABCF2P2-201ENST00000450549 296 ntBASIC4.43□□□□□ -1.7
RPA3P35244 VN1R32P-201ENST00000452234 905 ntBASIC4.43□□□□□ -1.7
RPA3P35244 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.43□□□□□ -1.7
RPA3P35244 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
RPA3P35244 RPL23AP72-201ENST00000492447 435 ntBASIC4.43□□□□□ -1.7
RPA3P35244 AC025445.1-201ENST00000502728 300 ntBASIC4.43□□□□□ -1.7
RPA3P35244 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.43□□□□□ -1.7
RPA3P35244 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.43□□□□□ -1.7
RPA3P35244 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 PHBP17-201ENST00000528576 541 ntBASIC4.43□□□□□ -1.7
RPA3P35244 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.43□□□□□ -1.7
RPA3P35244 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPA3P35244 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
RPA3P35244 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RPA3P35244 MFSD8-242ENST00000641690 4199 ntBASIC4.43□□□□□ -1.7
RPA3P35244 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RPA3P35244 AC087190.4-201ENST00000574616 8334 ntBASIC4.43□□□□□ -1.7
RPA3P35244 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RPA3P35244 AC012618.3-205ENST00000637896 1496 ntBASIC4.43□□□□□ -1.7
RPA3P35244 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.43□□□□□ -1.7
RPA3P35244 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPA3P35244 TTC39DP-201ENST00000416781 1688 ntBASIC4.42□□□□□ -1.7
RPA3P35244 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
RPA3P35244 AC021146.4-201ENST00000309229 279 ntBASIC4.42□□□□□ -1.7
RPA3P35244 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RPA3P35244 SNORD113.2-201ENST00000364166 89 ntBASIC4.42□□□□□ -1.7
RPA3P35244 RNVU1-6-201ENST00000364688 164 ntBASIC4.42□□□□□ -1.7
RPA3P35244 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RPA3P35244 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.42□□□□□ -1.7
RPA3P35244 SDHCP2-201ENST00000398565 501 ntBASIC4.42□□□□□ -1.7
RPA3P35244 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RPA3P35244 MIR1911-201ENST00000410783 80 ntBASIC4.42□□□□□ -1.7
RPA3P35244 RPL37P18-201ENST00000411602 243 ntBASIC4.42□□□□□ -1.7
RPA3P35244 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
RPA3P35244 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 ARAFP1-201ENST00000422172 605 ntBASIC4.42□□□□□ -1.7
RPA3P35244 AL513533.1-201ENST00000453728 415 ntBASIC4.42□□□□□ -1.7
RPA3P35244 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.42□□□□□ -1.7
RPA3P35244 AC007686.1-201ENST00000488511 463 ntBASIC4.42□□□□□ -1.7
RPA3P35244 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.42□□□□□ -1.7
RPA3P35244 OR5M7P-201ENST00000526140 972 ntBASIC4.42□□□□□ -1.7
RPA3P35244 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.42□□□□□ -1.7
RPA3P35244 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.42□□□□□ -1.7
RPA3P35244 AC069061.3-201ENST00000582254 823 ntBASIC4.42□□□□□ -1.7
RPA3P35244 MIR432-201ENST00000606207 94 ntBASIC4.42□□□□□ -1.7
RPA3P35244 LINC01808-202ENST00000641680 1116 ntBASIC4.42□□□□□ -1.7
RPA3P35244 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
RPA3P35244 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.42□□□□□ -1.7
RPA3P35244 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPA3P35244 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RPA3P35244 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.41□□□□□ -1.7
RPA3P35244 AC125257.1-201ENST00000560400 2930 ntBASIC4.41□□□□□ -1.7
RPA3P35244 VN2R3P-201ENST00000422626 1412 ntBASIC4.41□□□□□ -1.7
RPA3P35244 ZNF962P-201ENST00000443465 3140 ntBASIC4.41□□□□□ -1.7
RPA3P35244 OR4K15-201ENST00000305051 1216 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC079741.1-201ENST00000321498 212 ntBASIC4.41□□□□□ -1.7
RPA3P35244 SNORA70F-201ENST00000384142 135 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-1320P-201ENST00000390838 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-1269P-201ENST00000391139 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 CYB5AP4-201ENST00000396692 399 ntBASIC4.41□□□□□ -1.7
RPA3P35244 SMC4P1-201ENST00000414479 527 ntBASIC4.41□□□□□ -1.7
RPA3P35244 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPA3P35244 AC069213.2-201ENST00000420238 366 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC244033.1-201ENST00000426826 870 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.41□□□□□ -1.7
RPA3P35244 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 RPL23AP93-201ENST00000440847 484 ntBASIC4.41□□□□□ -1.7
RPA3P35244 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.41□□□□□ -1.7
RPA3P35244 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-599P-201ENST00000459383 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 RNU6-1193P-201ENST00000459461 107 ntBASIC4.41□□□□□ -1.7
RPA3P35244 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RPA3P35244 PARP4P3-201ENST00000510265 317 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms