Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 AC009501.3-201ENST00000605001 1352 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 MAPK10-349ENST00000641767 3661 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC010928.1-201ENST00000592477 1447 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HOXC13P31276 RNU6-185P-201ENST00000384421 107 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 RPS27AP11-201ENST00000402798 447 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 RANP4-201ENST00000413361 655 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AC007738.1-201ENST00000413892 348 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC004690.1-201ENST00000418216 328 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXC13P31276 AL160175.1-201ENST00000428124 247 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC068287.1-201ENST00000430283 295 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXC13P31276 EEF1A1P1-201ENST00000447052 739 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC13P31276 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HOXC13P31276 RPL7P48-201ENST00000461513 746 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC138832.1-201ENST00000522871 556 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC13P31276 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.17□□□□□ -1.58
HOXC13P31276 MTCO3P22-201ENST00000603219 784 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AC011453.2-201ENST00000603737 729 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC13P31276 MIR7973-1-201ENST00000614683 76 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 OR52H1-202ENST00000641796 1061 ntBASIC5.17□□□□□ -1.58
HOXC13P31276 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
HOXC13P31276 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.17□□□□□ -1.58
HOXC13P31276 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.17□□□□□ -1.58
HOXC13P31276 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HOXC13P31276 AC091046.3-201ENST00000631455 1574 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXC13P31276 AP002530.1-201ENST00000405705 684 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 AC119751.6-201ENST00000416712 186 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 VDAC1P6-201ENST00000430062 855 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 NPM1P33-201ENST00000438918 872 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 ZNF736P11Y-201ENST00000442535 1213 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 ZNF736P12Y-201ENST00000443152 1243 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 RPL34P26-201ENST00000445636 354 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AL691482.1-201ENST00000453255 87 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AL513533.1-201ENST00000453728 415 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 ZNF736P4Y-201ENST00000454995 1243 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC245028.2-201ENST00000458673 253 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AC023424.1-201ENST00000496058 459 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXC13P31276 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC13P31276 AL731537.2-201ENST00000561565 951 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 BGLT3-201ENST00000564523 994 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC011477.5-201ENST00000586571 259 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 AC068790.7-201ENST00000602347 528 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AL391001.1-201ENST00000602747 715 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 RPL26P30-202ENST00000602923 645 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 CR589904.2-201ENST00000612533 440 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AP006248.2-201ENST00000623309 592 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AP000648.2-201ENST00000624182 404 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 AC116563.2-201ENST00000624751 535 ntBASIC5.16□□□□□ -1.58
HOXC13P31276 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXC13P31276 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXC13P31276 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXC13P31276 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms