Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL451136.1-201ENST00000435399 325 ntBASIC5.34□□□□□ -1.55
CD40P25942 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.34□□□□□ -1.55
CD40P25942 MTCO1P48-201ENST00000448024 1096 ntBASIC5.34□□□□□ -1.55
CD40P25942 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 AC093899.1-201ENST00000457984 376 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC099521.1-201ENST00000482557 334 ntBASIC5.34□□□□□ -1.55
CD40P25942 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 BNIP3P41-201ENST00000503774 571 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40P25942 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.34□□□□□ -1.55
CD40P25942 RPS27AP18-201ENST00000515536 459 ntBASIC5.34□□□□□ -1.55
CD40P25942 RNA5SP216-201ENST00000516111 123 ntBASIC5.34□□□□□ -1.55
CD40P25942 RNU6-150P-201ENST00000516237 95 ntBASIC5.34□□□□□ -1.55
CD40P25942 RN7SKP238-201ENST00000516483 249 ntBASIC5.34□□□□□ -1.55
CD40P25942 SOD1P3-201ENST00000518682 454 ntBASIC5.34□□□□□ -1.55
CD40P25942 IGHV3-32-201ENST00000519182 355 ntBASIC5.34□□□□□ -1.55
CD40P25942 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40P25942 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.34□□□□□ -1.55
CD40P25942 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.34□□□□□ -1.55
CD40P25942 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.34□□□□□ -1.55
CD40P25942 AC068768.2-201ENST00000602352 343 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC067773.1-201ENST00000603284 1094 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC008555.7-201ENST00000605008 583 ntBASIC5.34□□□□□ -1.55
CD40P25942 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC138932.5-201ENST00000617759 563 ntBASIC5.34□□□□□ -1.55
CD40P25942 AC024884.1-201ENST00000620583 399 ntBASIC5.34□□□□□ -1.55
CD40P25942 AL160394.1-201ENST00000624765 724 ntBASIC5.34□□□□□ -1.55
CD40P25942 PABPC1P8-201ENST00000452851 2086 ntBASIC5.34□□□□□ -1.55
CD40P25942 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CD40P25942 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CD40P25942 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CD40P25942 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CD40P25942 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CD40P25942 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.34□□□□□ -1.56
CD40P25942 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CD40P25942 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.34□□□□□ -1.56
CD40P25942 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AC011369.2-201ENST00000624423 1567 ntBASIC5.33□□□□□ -1.56
CD40P25942 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AC133552.1-201ENST00000569988 4007 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL590763.1-201ENST00000398297 1545 ntBASIC5.33□□□□□ -1.56
CD40P25942 MTCO1P7-201ENST00000419523 1542 ntBASIC5.33□□□□□ -1.56
CD40P25942 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.33□□□□□ -1.56
CD40P25942 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.33□□□□□ -1.56
CD40P25942 CYP1D1P-201ENST00000416662 1433 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC005832.2-201ENST00000538921 1430 ntBASIC5.33□□□□□ -1.56
CD40P25942 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 FUNDC2P3-201ENST00000334716 533 ntBASIC5.33□□□□□ -1.56
CD40P25942 RN7SKP15-201ENST00000364742 309 ntBASIC5.33□□□□□ -1.56
CD40P25942 U3.23-201ENST00000391132 200 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC136624.1-201ENST00000400791 413 ntBASIC5.33□□□□□ -1.56
CD40P25942 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 RPL17P12-201ENST00000413391 526 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC109780.2-201ENST00000413467 845 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 SDCBPP2-201ENST00000424643 885 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC009965.2-201ENST00000425328 970 ntBASIC5.33□□□□□ -1.56
CD40P25942 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC104651.1-201ENST00000427559 735 ntBASIC5.33□□□□□ -1.56
CD40P25942 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 MTATP6P13-201ENST00000438531 667 ntBASIC5.33□□□□□ -1.56
CD40P25942 ELOCP10-201ENST00000440624 327 ntBASIC5.33□□□□□ -1.56
CD40P25942 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 AC073909.1-201ENST00000447112 999 ntBASIC5.33□□□□□ -1.56
CD40P25942 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AC092757.1-201ENST00000467293 467 ntBASIC5.33□□□□□ -1.56
CD40P25942 RPL9P33-201ENST00000484311 566 ntBASIC5.33□□□□□ -1.56
CD40P25942 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD40P25942 AP003396.4-201ENST00000527574 265 ntBASIC5.33□□□□□ -1.56
CD40P25942 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CD40P25942 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.33□□□□□ -1.56
CD40P25942 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 MIR4801-201ENST00000582704 82 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC027229.1-201ENST00000583887 253 ntBASIC5.33□□□□□ -1.56
CD40P25942 SNORD39.3-201ENST00000584451 71 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms