Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.3□□□□□ -1.56
NR4A1P22736 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR4A1P22736 AC245505.1-201ENST00000556398 224 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.3□□□□□ -1.56
NR4A1P22736 AC027104.1-201ENST00000563702 681 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.3□□□□□ -1.56
NR4A1P22736 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.3□□□□□ -1.56
NR4A1P22736 AL499605.1-201ENST00000604628 403 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AP003973.1-201ENST00000604639 691 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AF250324.2-201ENST00000608299 610 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AC024941.1-201ENST00000612250 334 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AC024023.1-201ENST00000624530 922 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.3□□□□□ -1.56
NR4A1P22736 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR4A1P22736 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NR4A1P22736 AC244258.1-201ENST00000637553 1071 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NR4A1P22736 AC073136.1-201ENST00000449426 2884 ntBASIC5.3□□□□□ -1.56
NR4A1P22736 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.3□□□□□ -1.56
NR4A1P22736 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR4A1P22736 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR4A1P22736 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.3□□□□□ -1.56
NR4A1P22736 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.3□□□□□ -1.56
NR4A1P22736 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR4A1P22736 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
NR4A1P22736 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR4A1P22736 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.29□□□□□ -1.56
NR4A1P22736 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC117409.1-201ENST00000470499 1310 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC011477.1-204ENST00000623416 1325 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.29□□□□□ -1.56
NR4A1P22736 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NR4A1P22736 U3.4-201ENST00000363352 213 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NR4A1P22736 TAF9BP1-201ENST00000396646 746 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR4A1P22736 DEFB108C-201ENST00000400154 252 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 MYL6P5-201ENST00000412707 459 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 PAICSP7-201ENST00000419829 962 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 DPPA2P1-201ENST00000428060 556 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 DEFA9P-201ENST00000433042 285 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 USP9YP35-201ENST00000435696 412 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 AL138787.1-202ENST00000437804 898 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 NDUFA5P5-201ENST00000468361 342 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 CCDC75P1-201ENST00000469247 791 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC104763.1-201ENST00000475274 360 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC091959.2-201ENST00000477363 321 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 WBP1LP4-201ENST00000505043 344 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC004069.2-201ENST00000505438 1114 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC109464.2-201ENST00000510242 943 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 GAPDHP62-201ENST00000515313 990 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
NR4A1P22736 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.29□□□□□ -1.56
NR4A1P22736 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 DPPA3P2-202ENST00000557188 1219 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 ATP5F1P7-201ENST00000567330 760 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.29□□□□□ -1.56
NR4A1P22736 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.29□□□□□ -1.56
NR4A1P22736 AL592221.1-201ENST00000605266 382 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC018690.1-201ENST00000608144 626 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AL121873.1-201ENST00000616013 524 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 MIR6071-201ENST00000616741 78 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.29□□□□□ -1.56
NR4A1P22736 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR4A1P22736 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC004520.1-201ENST00000608362 1413 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.29□□□□□ -1.56
NR4A1P22736 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NR4A1P22736 AC073544.1-201ENST00000600110 1595 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR4A1P22736 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR4A1P22736 AL354854.1-201ENST00000455940 1363 ntBASIC5.29□□□□□ -1.56
NR4A1P22736 SPATA2P1-201ENST00000431223 2055 ntBASIC5.28□□□□□ -1.56
NR4A1P22736 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.28□□□□□ -1.56
NR4A1P22736 LYARP1-201ENST00000436977 1501 ntBASIC5.28□□□□□ -1.56
NR4A1P22736 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
NR4A1P22736 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.28□□□□□ -1.56
NR4A1P22736 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NR4A1P22736 AC092376.2-201ENST00000622621 4116 ntBASIC5.28□□□□□ -1.56
NR4A1P22736 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NR4A1P22736 OR10R3P-201ENST00000361688 942 ntBASIC5.28□□□□□ -1.56
NR4A1P22736 MIR142-201ENST00000384835 87 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms