Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HDGFP1-201ENST00000405943 252 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RN7SKP267-201ENST00000410381 285 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RN7SKP106-201ENST00000410832 272 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RPL21P108-201ENST00000413857 481 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 AC093084.1-201ENST00000424233 687 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 TXNP2-201ENST00000443918 295 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.61□□□□□ -1.67
XRCC1P18887 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.61□□□□□ -1.67
XRCC1P18887 RPL12P20-201ENST00000475538 479 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
XRCC1P18887 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.61□□□□□ -1.67
XRCC1P18887 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 OR5M2P-201ENST00000529003 936 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 AC022882.1-201ENST00000532142 501 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RN7SL652P-201ENST00000577769 300 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 FAM106CP-201ENST00000582212 507 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.61□□□□□ -1.67
XRCC1P18887 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 RMST_5.1-201ENST00000618704 126 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.61□□□□□ -1.67
XRCC1P18887 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
XRCC1P18887 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.61□□□□□ -1.67
XRCC1P18887 EOGT-210ENST00000615922 1931 ntBASIC4.61□□□□□ -1.67
XRCC1P18887 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
XRCC1P18887 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
XRCC1P18887 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
XRCC1P18887 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.61□□□□□ -1.67
XRCC1P18887 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
XRCC1P18887 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
XRCC1P18887 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.6□□□□□ -1.67
XRCC1P18887 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 MAPK10-320ENST00000641462 6696 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
XRCC1P18887 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 AC104297.1-201ENST00000393779 870 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AL590762.2-201ENST00000395798 571 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 RPS20P25-201ENST00000412447 352 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 ATG4AP1-201ENST00000416893 538 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC140479.3-201ENST00000418944 1126 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 MTCO1P57-201ENST00000432182 261 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 H2AFZP5-201ENST00000446960 382 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC096741.1-201ENST00000472250 846 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AC006463.2-201ENST00000473326 348 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.6□□□□□ -1.67
XRCC1P18887 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.6□□□□□ -1.67
XRCC1P18887 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.6□□□□□ -1.67
XRCC1P18887 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC209154.1-201ENST00000582156 337 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AC019193.2-201ENST00000610012 634 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 AC105105.5-201ENST00000622635 1294 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AP000346.3-201ENST00000622821 210 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 AC011815.3-201ENST00000624194 473 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
XRCC1P18887 AP001002.1-201ENST00000625148 1513 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
XRCC1P18887 MAPK10-303ENST00000641324 3959 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
XRCC1P18887 CASC19-204ENST00000641001 2055 ntBASIC4.6□□□□□ -1.67
XRCC1P18887 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
XRCC1P18887 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
XRCC1P18887 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
XRCC1P18887 SNORD113.2-201ENST00000364166 89 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.59□□□□□ -1.67
XRCC1P18887 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 ST13P16-201ENST00000401760 781 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
XRCC1P18887 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.59□□□□□ -1.67
XRCC1P18887 FAR2P2-201ENST00000413041 594 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 CEACAMP8-201ENST00000413902 580 ntBASIC4.59□□□□□ -1.67
XRCC1P18887 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
XRCC1P18887 Z74021.1-201ENST00000423610 407 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms