Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 AL592293.2-201ENST00000422292 996 ntBASIC5.73□□□□□ -1.49
ATF4P18848 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC079807.1-201ENST00000429993 481 ntBASIC5.73□□□□□ -1.49
ATF4P18848 MTATP6P30-201ENST00000443540 664 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC5.73□□□□□ -1.49
ATF4P18848 TCEA1P1-201ENST00000449716 880 ntBASIC5.73□□□□□ -1.49
ATF4P18848 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.73□□□□□ -1.49
ATF4P18848 snoU13.29-201ENST00000459370 104 ntBASIC5.73□□□□□ -1.49
ATF4P18848 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 RN7SL861P-201ENST00000473793 285 ntBASIC5.73□□□□□ -1.49
ATF4P18848 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 TAAR3P-202ENST00000481759 1025 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 AC108078.1-201ENST00000508073 725 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC097460.2-201ENST00000511857 741 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.73□□□□□ -1.49
ATF4P18848 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 SNORA70.11-201ENST00000515987 138 ntBASIC5.73□□□□□ -1.49
ATF4P18848 SNORA70.13-201ENST00000516116 138 ntBASIC5.73□□□□□ -1.49
ATF4P18848 RNU6-718P-201ENST00000516166 105 ntBASIC5.73□□□□□ -1.49
ATF4P18848 Y_RNA.672-201ENST00000516289 104 ntBASIC5.73□□□□□ -1.49
ATF4P18848 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 AC127381.1-201ENST00000555979 939 ntBASIC5.73□□□□□ -1.49
ATF4P18848 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC5.73□□□□□ -1.49
ATF4P18848 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.73□□□□□ -1.49
ATF4P18848 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 HMGN1P30-201ENST00000589286 268 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.73□□□□□ -1.49
ATF4P18848 AC245014.2-201ENST00000603689 287 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC246785.4-201ENST00000605374 287 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AC016394.1-201ENST00000608444 833 ntBASIC5.73□□□□□ -1.49
ATF4P18848 IGKV1OR1-1-201ENST00000613775 347 ntBASIC5.73□□□□□ -1.49
ATF4P18848 AP000842.4-201ENST00000638781 748 ntBASIC5.73□□□□□ -1.49
ATF4P18848 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
ATF4P18848 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATF4P18848 ATP5A1P10-201ENST00000622403 1603 ntBASIC5.73□□□□□ -1.49
ATF4P18848 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC5.73□□□□□ -1.49
ATF4P18848 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATF4P18848 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATF4P18848 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATF4P18848 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
ATF4P18848 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATF4P18848 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATF4P18848 AC090971.4-201ENST00000560291 1800 ntBASIC5.72□□□□□ -1.49
ATF4P18848 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATF4P18848 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 Y_RNA.46-201ENST00000362695 102 ntBASIC5.72□□□□□ -1.49
ATF4P18848 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 MIR498-201ENST00000385134 124 ntBASIC5.72□□□□□ -1.49
ATF4P18848 MIR541-201ENST00000401360 84 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL132875.1-201ENST00000403623 949 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL049697.2-201ENST00000403708 294 ntBASIC5.72□□□□□ -1.49
ATF4P18848 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 Y_RNA.604-201ENST00000410574 102 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 AC007568.1-201ENST00000422912 471 ntBASIC5.72□□□□□ -1.49
ATF4P18848 ISCA1P6-201ENST00000427740 390 ntBASIC5.72□□□□□ -1.49
ATF4P18848 EIF4A1P5-201ENST00000428062 1095 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 HBBP1-201ENST00000433329 439 ntBASIC5.72□□□□□ -1.49
ATF4P18848 MTND4LP10-201ENST00000435146 291 ntBASIC5.72□□□□□ -1.49
ATF4P18848 EFCAB14P1-201ENST00000442409 463 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AC244021.2-201ENST00000445260 529 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 BX276092.4-201ENST00000452056 248 ntBASIC5.72□□□□□ -1.49
ATF4P18848 MTCO3P20-201ENST00000454926 688 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.72□□□□□ -1.49
ATF4P18848 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 AP001992.1-205ENST00000462248 379 ntBASIC5.72□□□□□ -1.49
ATF4P18848 RN7SL213P-201ENST00000463482 317 ntBASIC5.72□□□□□ -1.49
ATF4P18848 MTCO3P38-201ENST00000468910 766 ntBASIC5.72□□□□□ -1.49
ATF4P18848 RN7SL89P-201ENST00000480252 283 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AC011005.3-201ENST00000491624 395 ntBASIC5.72□□□□□ -1.49
ATF4P18848 OR7E83P-201ENST00000511021 970 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.72□□□□□ -1.49
ATF4P18848 RNU2-46P-201ENST00000517038 113 ntBASIC5.72□□□□□ -1.49
ATF4P18848 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.72□□□□□ -1.49
ATF4P18848 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms