Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGA1P17096 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 AC093824.1-201ENST00000508796 343 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGA1P17096 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.46□□□□□ -1.7
HMGA1P17096 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGA1P17096 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGA1P17096 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGA1P17096 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.46□□□□□ -1.7
HMGA1P17096 AL020997.2-201ENST00000602607 184 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGA1P17096 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGA1P17096 AP000542.2-201ENST00000623199 6179 ntBASIC4.46□□□□□ -1.7
HMGA1P17096 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.46□□□□□ -1.7
HMGA1P17096 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGA1P17096 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGA1P17096 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 AC005005.4-201ENST00000623789 16698 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA1P17096 EOGT-210ENST00000615922 1931 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 RN7SKP280-201ENST00000364196 304 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
HMGA1P17096 SNORD66.1-201ENST00000391230 76 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 PPIAP31-201ENST00000405422 495 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGA1P17096 AL590806.1-201ENST00000415818 853 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA1P17096 YY1P1-201ENST00000427625 668 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 CEACAMP1-201ENST00000434624 1035 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AL356276.2-201ENST00000435919 558 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 SERPINA7P1-201ENST00000443077 631 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGA1P17096 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGA1P17096 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AC108064.1-201ENST00000513791 460 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AC090151.1-201ENST00000520784 730 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.45□□□□□ -1.7
HMGA1P17096 CYCSP28-201ENST00000534284 321 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 OR8R1P-201ENST00000543943 764 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGA1P17096 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.45□□□□□ -1.7
HMGA1P17096 SNORD91B-202ENST00000608459 222 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA1P17096 AL353726.1-201ENST00000614041 1000 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 AC112484.5-201ENST00000624189 228 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA1P17096 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
HMGA1P17096 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.45□□□□□ -1.7
HMGA1P17096 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA1P17096 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA1P17096 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
HMGA1P17096 AC012519.1-201ENST00000424588 610 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 MRPL50P1-201ENST00000431951 384 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA1P17096 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA1P17096 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA1P17096 RPL5P32-201ENST00000454085 879 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA1P17096 RNA5SP246-201ENST00000458909 119 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 AC104164.2-201ENST00000496953 495 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 AC106785.1-201ENST00000565935 262 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA1P17096 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 AP001642.1-201ENST00000624727 2117 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGA1P17096 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.44□□□□□ -1.7
HMGA1P17096 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGA1P17096 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
HMGA1P17096 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA1P17096 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA1P17096 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HMGA1P17096 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGA1P17096 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMGA1P17096 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms