Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 UBE2FP2-201ENST00000566646 462 ntBASIC4.89□□□□□ -1.63
KRT3P12035 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 AC091042.1-201ENST00000579213 173 ntBASIC4.89□□□□□ -1.63
KRT3P12035 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT3P12035 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.89□□□□□ -1.63
KRT3P12035 AL021707.7-201ENST00000607991 416 ntBASIC4.89□□□□□ -1.63
KRT3P12035 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.89□□□□□ -1.63
KRT3P12035 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 AC019080.5-201ENST00000624891 757 ntBASIC4.89□□□□□ -1.63
KRT3P12035 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.89□□□□□ -1.63
KRT3P12035 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
KRT3P12035 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT3P12035 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT3P12035 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
KRT3P12035 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
KRT3P12035 Z95327.2-201ENST00000414579 1873 ntBASIC4.89□□□□□ -1.63
KRT3P12035 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT3P12035 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
KRT3P12035 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
KRT3P12035 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT3P12035 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT3P12035 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT3P12035 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT3P12035 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
KRT3P12035 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT3P12035 MIR550A3-201ENST00000390735 95 ntBASIC4.88□□□□□ -1.63
KRT3P12035 Z98745.1-201ENST00000402553 494 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.88□□□□□ -1.63
KRT3P12035 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.88□□□□□ -1.63
KRT3P12035 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
KRT3P12035 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 FHP1-201ENST00000442741 703 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC099063.2-201ENST00000446360 662 ntBASIC4.88□□□□□ -1.63
KRT3P12035 VN1R48P-201ENST00000448149 1036 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC092324.1-201ENST00000468671 324 ntBASIC4.88□□□□□ -1.63
KRT3P12035 RPL23AP37-201ENST00000479658 549 ntBASIC4.88□□□□□ -1.63
KRT3P12035 RN7SL826P-201ENST00000479724 288 ntBASIC4.88□□□□□ -1.63
KRT3P12035 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 RPL36AP41-201ENST00000493820 306 ntBASIC4.88□□□□□ -1.63
KRT3P12035 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.88□□□□□ -1.63
KRT3P12035 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT3P12035 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.88□□□□□ -1.63
KRT3P12035 AC105129.1-201ENST00000560250 297 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.88□□□□□ -1.63
KRT3P12035 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT3P12035 SNX6P1-201ENST00000601728 1224 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC098935.2-201ENST00000604222 466 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AC019131.2-201ENST00000609071 870 ntBASIC4.88□□□□□ -1.63
KRT3P12035 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.88□□□□□ -1.63
KRT3P12035 AC135352.1-201ENST00000506173 1418 ntBASIC4.88□□□□□ -1.63
KRT3P12035 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
KRT3P12035 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KRT3P12035 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 MAPK10-303ENST00000641324 3959 ntBASIC4.87□□□□□ -1.63
KRT3P12035 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.87□□□□□ -1.63
KRT3P12035 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 RNU6-178P-201ENST00000384631 104 ntBASIC4.87□□□□□ -1.63
KRT3P12035 MIR921-201ENST00000401133 56 ntBASIC4.87□□□□□ -1.63
KRT3P12035 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 AC093084.1-201ENST00000424233 687 ntBASIC4.87□□□□□ -1.63
KRT3P12035 MTND4LP13-201ENST00000425022 298 ntBASIC4.87□□□□□ -1.63
KRT3P12035 RPL21P43-201ENST00000425440 472 ntBASIC4.87□□□□□ -1.63
KRT3P12035 MTND4LP14-201ENST00000429447 288 ntBASIC4.87□□□□□ -1.63
KRT3P12035 Z80107.2-201ENST00000445127 392 ntBASIC4.87□□□□□ -1.63
KRT3P12035 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 AL627224.1-201ENST00000448334 444 ntBASIC4.87□□□□□ -1.63
KRT3P12035 AL500527.1-201ENST00000448532 255 ntBASIC4.87□□□□□ -1.63
KRT3P12035 RPL5P13-201ENST00000462840 709 ntBASIC4.87□□□□□ -1.63
KRT3P12035 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT3P12035 AC011005.3-201ENST00000491624 395 ntBASIC4.87□□□□□ -1.63
KRT3P12035 RPS4XP18-201ENST00000495480 763 ntBASIC4.87□□□□□ -1.63
KRT3P12035 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT3P12035 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT3P12035 HMGB1P46-201ENST00000520062 610 ntBASIC4.87□□□□□ -1.63
KRT3P12035 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.87□□□□□ -1.63
KRT3P12035 AC022882.1-201ENST00000532142 501 ntBASIC4.87□□□□□ -1.63
KRT3P12035 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.87□□□□□ -1.63
KRT3P12035 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.87□□□□□ -1.63
KRT3P12035 AC209154.1-201ENST00000582156 337 ntBASIC4.87□□□□□ -1.63
KRT3P12035 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
KRT3P12035 AC233280.2-201ENST00000603917 1070 ntBASIC4.87□□□□□ -1.63
KRT3P12035 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KRT3P12035 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.87□□□□□ -1.63
KRT3P12035 AL391684.1-202ENST00000641293 1636 ntBASIC4.86□□□□□ -1.63
KRT3P12035 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms