Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 GYG1P1-201ENST00000460864 698 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 CYCSP20-201ENST00000473154 315 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC006463.2-201ENST00000473326 348 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 OR5H3P-201ENST00000502817 919 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 MRPS33P2-201ENST00000507850 322 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 IGKV2D-10-201ENST00000520194 281 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC068993.1-201ENST00000546724 589 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 BNIP3P1-201ENST00000547295 580 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC084759.1-201ENST00000561168 290 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 EIF1P5-201ENST00000585002 234 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 RMST_10.1-201ENST00000616309 154 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AL121890.2-201ENST00000617644 465 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AP000648.2-201ENST00000624182 404 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 GTF2H2B-203ENST00000508065 1432 ntBASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.7□□□□□ -1.66
RAB40ALP0C0E4 AC099654.2-201ENST00000433031 1980 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL731532.2-201ENST00000623542 1953 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC100778.3-201ENST00000580060 1750 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 EI24P3-201ENST00000399046 1062 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 FAR2P2-201ENST00000413041 594 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 BX664727.1-201ENST00000416024 466 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL807761.1-201ENST00000417622 171 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 FAR2P4-202ENST00000425399 584 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL353093.1-201ENST00000441292 436 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL354710.1-201ENST00000453641 246 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 RPS29P33-201ENST00000456717 146 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 RN7SL738P-201ENST00000470264 297 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC104687.1-201ENST00000485829 412 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 OR7H2P-201ENST00000513483 306 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 GLRXP2-201ENST00000555594 321 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC106734.1-201ENST00000568646 663 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC104072.1-201ENST00000568817 668 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 RN7SL52P-201ENST00000584271 284 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC234771.5-201ENST00000600161 514 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AC245100.7-201ENST00000609678 442 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 MIR6780A-201ENST00000615089 68 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 RN7SL722P-201ENST00000617780 284 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 RN7SL565P-201ENST00000618246 284 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.69□□□□□ -1.66
RAB40ALP0C0E4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms