Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RPL12P28-201ENST00000430852 489 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.32□□□□□ -1.72
SFTPBP07988 RPS24P8-201ENST00000431490 402 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 RPS20P1-201ENST00000434853 354 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 FTH1P16-201ENST00000435241 552 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 RPS27P5-201ENST00000444247 244 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AC004980.3-201ENST00000447046 365 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AL031584.1-201ENST00000447169 754 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 MTND2P8-201ENST00000450555 1025 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 RN7SL443P-201ENST00000464331 290 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 PPIAP21-201ENST00000464473 501 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AC022795.1-201ENST00000473808 480 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 BX284632.1-201ENST00000478218 541 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC004453.1-201ENST00000487895 408 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC111193.1-201ENST00000504097 155 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 RNA5SP360-201ENST00000516555 118 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.32□□□□□ -1.72
SFTPBP07988 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC024940.3-201ENST00000538551 316 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 NDUFB4P11-201ENST00000560510 395 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC079148.1-201ENST00000565944 819 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 TAS2R6P-201ENST00000605022 826 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.32□□□□□ -1.72
SFTPBP07988 AP001033.2-201ENST00000609701 1003 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AC009163.6-201ENST00000612367 342 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 AC090510.2-201ENST00000617465 629 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.32□□□□□ -1.72
SFTPBP07988 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SFTPBP07988 AL596275.2-204ENST00000641628 552 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 AL596275.2-206ENST00000641957 626 ntBASIC4.32□□□□□ -1.72
SFTPBP07988 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.32□□□□□ -1.72
SFTPBP07988 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SFTPBP07988 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SFTPBP07988 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.32□□□□□ -1.72
SFTPBP07988 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SFTPBP07988 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SFTPBP07988 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SFTPBP07988 AC120338.1-201ENST00000625074 1541 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SFTPBP07988 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 AL672167.1-205ENST00000641112 3080 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SFTPBP07988 RNU6-792P-201ENST00000363490 107 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RN7SKP113-201ENST00000363891 295 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RNU6-146P-201ENST00000384602 108 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 RN7SKP125-201ENST00000410481 302 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RN7SKP247-201ENST00000411094 308 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RNU2-72P-201ENST00000411175 163 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC019050.1-201ENST00000418508 492 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC023128.2-201ENST00000420880 1223 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RPL12P34-201ENST00000424532 479 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC074367.1-201ENST00000438685 1125 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.31□□□□□ -1.72
SFTPBP07988 TPTE2P6-202ENST00000445572 1007 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC239809.1-201ENST00000450470 217 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC006511.1-201ENST00000470614 315 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RPL7AP6-201ENST00000477943 801 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 RN7SL441P-201ENST00000492388 296 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SFTPBP07988 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SFTPBP07988 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC138938.1-201ENST00000515431 782 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 VTA1P2-201ENST00000520205 911 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 SMARCE1P4-201ENST00000523647 241 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SFTPBP07988 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC090515.3-201ENST00000560431 315 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AGGF1P9-201ENST00000561884 913 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.31□□□□□ -1.72
SFTPBP07988 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC115085.1-201ENST00000588924 229 ntBASIC4.31□□□□□ -1.72
SFTPBP07988 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.31□□□□□ -1.72
SFTPBP07988 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms