Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.72□□□□□ -1.65
APOEP02649 Z98755.1-201ENST00000407015 1384 ntBASIC4.72□□□□□ -1.65
APOEP02649 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
APOEP02649 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
APOEP02649 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
APOEP02649 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.71□□□□□ -1.65
APOEP02649 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
APOEP02649 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.71□□□□□ -1.66
APOEP02649 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
APOEP02649 RNA5SP372-201ENST00000390836 115 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC007068.1-201ENST00000396690 844 ntBASIC4.71□□□□□ -1.66
APOEP02649 SEPT7P2-202ENST00000398921 823 ntBASIC4.71□□□□□ -1.66
APOEP02649 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.71□□□□□ -1.66
APOEP02649 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.71□□□□□ -1.66
APOEP02649 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.71□□□□□ -1.66
APOEP02649 RPL23AP1-201ENST00000428990 471 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC068287.1-201ENST00000430283 295 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.71□□□□□ -1.66
APOEP02649 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.71□□□□□ -1.66
APOEP02649 RPL23AP65-201ENST00000475608 468 ntBASIC4.71□□□□□ -1.66
APOEP02649 RN7SL459P-201ENST00000481078 302 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC015795.1-201ENST00000513669 327 ntBASIC4.71□□□□□ -1.66
APOEP02649 RN7SKP5-201ENST00000517045 272 ntBASIC4.71□□□□□ -1.66
APOEP02649 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.71□□□□□ -1.66
APOEP02649 AC008126.1-201ENST00000549019 480 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC084783.1-201ENST00000565846 910 ntBASIC4.71□□□□□ -1.66
APOEP02649 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
APOEP02649 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
APOEP02649 AC008966.2-201ENST00000606157 453 ntBASIC4.71□□□□□ -1.66
APOEP02649 MIR6748-201ENST00000610433 71 ntBASIC4.71□□□□□ -1.66
APOEP02649 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.71□□□□□ -1.66
APOEP02649 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.71□□□□□ -1.66
APOEP02649 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
APOEP02649 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.71□□□□□ -1.66
APOEP02649 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
APOEP02649 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
APOEP02649 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.7□□□□□ -1.66
APOEP02649 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
APOEP02649 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
APOEP02649 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.7□□□□□ -1.66
APOEP02649 AC013268.2-201ENST00000420753 337 ntBASIC4.7□□□□□ -1.66
APOEP02649 AC009480.2-201ENST00000422916 432 ntBASIC4.7□□□□□ -1.66
APOEP02649 RPEP3-201ENST00000425462 676 ntBASIC4.7□□□□□ -1.66
APOEP02649 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.7□□□□□ -1.66
APOEP02649 AC108022.1-201ENST00000493466 478 ntBASIC4.7□□□□□ -1.66
APOEP02649 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
APOEP02649 VWA8P1-201ENST00000510889 176 ntBASIC4.7□□□□□ -1.66
APOEP02649 KCTD9P6-201ENST00000522306 950 ntBASIC4.7□□□□□ -1.66
APOEP02649 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 GLRXP2-201ENST00000555594 321 ntBASIC4.7□□□□□ -1.66
APOEP02649 AC027455.1-201ENST00000574104 594 ntBASIC4.7□□□□□ -1.66
APOEP02649 SLC25A36P1-201ENST00000590111 465 ntBASIC4.7□□□□□ -1.66
APOEP02649 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.7□□□□□ -1.66
APOEP02649 AC023762.1-201ENST00000603280 584 ntBASIC4.7□□□□□ -1.66
APOEP02649 AC026979.4-201ENST00000606555 645 ntBASIC4.7□□□□□ -1.66
APOEP02649 AC091979.2-201ENST00000607514 214 ntBASIC4.7□□□□□ -1.66
APOEP02649 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.7□□□□□ -1.66
APOEP02649 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
APOEP02649 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
APOEP02649 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.7□□□□□ -1.66
APOEP02649 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.7□□□□□ -1.66
APOEP02649 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.69□□□□□ -1.66
APOEP02649 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
APOEP02649 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 AL137100.1-201ENST00000556703 1620 ntBASIC4.69□□□□□ -1.66
APOEP02649 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 RAD17P1-201ENST00000418130 2042 ntBASIC4.69□□□□□ -1.66
APOEP02649 AC093909.5-201ENST00000621839 1799 ntBASIC4.69□□□□□ -1.66
APOEP02649 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
APOEP02649 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.69□□□□□ -1.66
APOEP02649 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.69□□□□□ -1.66
APOEP02649 AC019155.1-201ENST00000382242 574 ntBASIC4.69□□□□□ -1.66
APOEP02649 MIR659-201ENST00000384963 97 ntBASIC4.69□□□□□ -1.66
APOEP02649 RPL7AP25-201ENST00000423357 805 ntBASIC4.69□□□□□ -1.66
APOEP02649 RPL21P91-201ENST00000429231 479 ntBASIC4.69□□□□□ -1.66
APOEP02649 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 RPL12P28-201ENST00000430852 489 ntBASIC4.69□□□□□ -1.66
APOEP02649 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.69□□□□□ -1.66
APOEP02649 CCDC75P1-201ENST00000469247 791 ntBASIC4.69□□□□□ -1.66
APOEP02649 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.69□□□□□ -1.66
APOEP02649 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.69□□□□□ -1.66
APOEP02649 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.69□□□□□ -1.66
APOEP02649 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.69□□□□□ -1.66
APOEP02649 AC010547.7-201ENST00000570323 333 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms