Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR551B-201ENST00000384984 96 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC004386.1-201ENST00000393214 761 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC240504.1-201ENST00000395709 845 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 MIR1183-201ENST00000408856 89 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 RN7SKP126-201ENST00000411143 300 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC066692.1-201ENST00000421721 457 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 ATP5HP2-201ENST00000433885 485 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC012075.1-201ENST00000436549 580 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 H2AFZP5-201ENST00000446960 382 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AL157884.3-201ENST00000448273 1184 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 RPL31P20-201ENST00000449593 360 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 CLIC4P1-201ENST00000453177 535 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 OR7L1P-201ENST00000456181 380 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 APOOP2-201ENST00000461561 539 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 IGLV2-34-201ENST00000490007 283 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 UBA52P3-201ENST00000491303 382 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 PRELID3BP7-201ENST00000503606 469 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 SEC11B-201ENST00000518383 499 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1BO75841 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC3.82□□□□□ -1.8
UPK1BO75841 HMGN1P26-201ENST00000558737 303 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC095055.1-201ENST00000603472 1113 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AC005828.7-201ENST00000607331 556 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC128687.2-201ENST00000609657 566 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC064801.1-201ENST00000612025 407 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 AL590410.1-201ENST00000617925 333 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 OR8A1-204ENST00000642111 1145 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.82□□□□□ -1.8
UPK1BO75841 AC008725.1-201ENST00000605123 2263 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
UPK1BO75841 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UPK1BO75841 AC099654.2-201ENST00000433031 1980 ntBASIC3.82□□□□□ -1.8
UPK1BO75841 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1BO75841 AL442639.1-201ENST00000625030 1899 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1BO75841 LINC00622-201ENST00000562811 1570 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1BO75841 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1BO75841 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UPK1BO75841 OR11H4-201ENST00000315409 1082 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UPK1BO75841 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UPK1BO75841 AL359885.1-201ENST00000415786 903 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 CHEK2P3-201ENST00000416118 248 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.81□□□□□ -1.8
UPK1BO75841 AC087650.1-201ENST00000431445 468 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1BO75841 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1BO75841 ELOCP10-201ENST00000440624 327 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1BO75841 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1BO75841 NDUFA5P8-201ENST00000449019 346 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC092647.2-201ENST00000452998 253 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AL354710.1-201ENST00000453641 246 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1BO75841 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1BO75841 BTF3L4P4-201ENST00000506381 449 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 NACAP5-201ENST00000509863 636 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC108471.1-201ENST00000513977 287 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 RNU6-347P-201ENST00000516658 105 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.81□□□□□ -1.8
UPK1BO75841 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.81□□□□□ -1.8
UPK1BO75841 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1BO75841 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1BO75841 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.81□□□□□ -1.8
UPK1BO75841 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UPK1BO75841 AC091515.1-201ENST00000548110 679 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 HMGB3P26-201ENST00000560051 582 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1BO75841 AC009101.1-201ENST00000568135 242 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.81□□□□□ -1.8
UPK1BO75841 BMS1P7-201ENST00000602440 1052 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC084373.1-201ENST00000603311 235 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 FO393422.1-201ENST00000603908 708 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 ELOCP34-201ENST00000604436 327 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AL034351.1-201ENST00000605288 668 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC109309.2-201ENST00000612597 332 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AL627230.1-201ENST00000613077 211 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC099494.2-201ENST00000623371 978 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 AC092159.4-201ENST00000624944 550 ntBASIC3.81□□□□□ -1.8
UPK1BO75841 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UPK1BO75841 AP000756.2-201ENST00000624168 2567 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms