Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 AC005034.3-201ENST00000604845 1747 ntBASIC7.75□□□□□ -1.17
RNF40O75150 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 PPBPP2-201ENST00000513150 1362 ntBASIC7.75□□□□□ -1.17
RNF40O75150 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF40O75150 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 Y_RNA.5-201ENST00000362334 102 ntBASIC7.75□□□□□ -1.17
RNF40O75150 SNORA73B-201ENST00000363217 204 ntBASIC7.75□□□□□ -1.17
RNF40O75150 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 ARMCX7P-201ENST00000372828 562 ntBASIC7.75□□□□□ -1.17
RNF40O75150 Y_RNA.527-201ENST00000384573 102 ntBASIC7.75□□□□□ -1.17
RNF40O75150 AL049697.2-201ENST00000403708 294 ntBASIC7.75□□□□□ -1.17
RNF40O75150 RPSAP72-201ENST00000407020 358 ntBASIC7.75□□□□□ -1.17
RNF40O75150 RPL31P52-201ENST00000407532 367 ntBASIC7.75□□□□□ -1.17
RNF40O75150 MIR548K-201ENST00000408406 116 ntBASIC7.75□□□□□ -1.17
RNF40O75150 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF40O75150 PHB2P1-201ENST00000434943 890 ntBASIC7.75□□□□□ -1.17
RNF40O75150 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF40O75150 SNRPEP7-201ENST00000438350 220 ntBASIC7.75□□□□□ -1.17
RNF40O75150 HMGB1P12-201ENST00000438594 598 ntBASIC7.75□□□□□ -1.17
RNF40O75150 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF40O75150 OR13K1P-201ENST00000444577 975 ntBASIC7.75□□□□□ -1.17
RNF40O75150 RPL21P23-201ENST00000446654 460 ntBASIC7.75□□□□□ -1.17
RNF40O75150 RN7SL180P-201ENST00000466769 294 ntBASIC7.75□□□□□ -1.17
RNF40O75150 MTCYBP40-201ENST00000509390 1135 ntBASIC7.75□□□□□ -1.17
RNF40O75150 HMGB1P19-201ENST00000517578 577 ntBASIC7.75□□□□□ -1.17
RNF40O75150 AC105031.1-201ENST00000518550 476 ntBASIC7.75□□□□□ -1.17
RNF40O75150 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.75□□□□□ -1.17
RNF40O75150 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.75□□□□□ -1.17
RNF40O75150 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.75□□□□□ -1.17
RNF40O75150 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 AL513218.1-201ENST00000606527 391 ntBASIC7.75□□□□□ -1.17
RNF40O75150 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 AC243725.1-201ENST00000637164 436 ntBASIC7.75□□□□□ -1.17
RNF40O75150 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 AC112243.1-201ENST00000623949 3851 ntBASIC7.75□□□□□ -1.17
RNF40O75150 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.75□□□□□ -1.17
RNF40O75150 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 AC068870.3-201ENST00000625077 2536 ntBASIC7.75□□□□□ -1.17
RNF40O75150 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RNF40O75150 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RNF40O75150 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC7.75□□□□□ -1.17
RNF40O75150 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RNF40O75150 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.74□□□□□ -1.17
RNF40O75150 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RNF40O75150 AL357556.1-201ENST00000421884 1388 ntBASIC7.74□□□□□ -1.17
RNF40O75150 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
RNF40O75150 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
RNF40O75150 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF40O75150 RNU6-1115P-201ENST00000362490 106 ntBASIC7.74□□□□□ -1.17
RNF40O75150 MT-TP-201ENST00000387461 68 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AC073264.1-201ENST00000411508 416 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF40O75150 AL359633.1-201ENST00000421403 310 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AC018865.2-201ENST00000423631 129 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF40O75150 AC092809.1-201ENST00000441469 474 ntBASIC7.74□□□□□ -1.17
RNF40O75150 TXNP1-201ENST00000441872 371 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF40O75150 MTND3P16-201ENST00000452205 344 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF40O75150 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF40O75150 AL356010.1-201ENST00000456364 102 ntBASIC7.74□□□□□ -1.17
RNF40O75150 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF40O75150 AC095059.2-201ENST00000510601 933 ntBASIC7.74□□□□□ -1.17
RNF40O75150 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF40O75150 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF40O75150 RNU6-976P-201ENST00000516086 111 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms