Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 CCNHP1-201ENST00000513311 678 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 AC008126.1-201ENST00000549019 480 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 AC011270.1-201ENST00000558606 583 ntBASIC4.94□□□□□ -1.62
MSH4O15457 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 RPL23AP97-201ENST00000568955 471 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.94□□□□□ -1.62
MSH4O15457 AC114781.5-201ENST00000615297 108 ntBASIC4.94□□□□□ -1.62
MSH4O15457 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 MAPK10-303ENST00000641324 3959 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AC133552.1-201ENST00000569988 4007 ntBASIC4.94□□□□□ -1.62
MSH4O15457 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
MSH4O15457 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.94□□□□□ -1.62
MSH4O15457 MFSD8-242ENST00000641690 4199 ntBASIC4.94□□□□□ -1.62
MSH4O15457 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.93□□□□□ -1.62
MSH4O15457 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH4O15457 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
MSH4O15457 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
MSH4O15457 VDAC1P9-201ENST00000412766 841 ntBASIC4.93□□□□□ -1.62
MSH4O15457 NRBF2P2-201ENST00000413087 861 ntBASIC4.93□□□□□ -1.62
MSH4O15457 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH4O15457 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.93□□□□□ -1.62
MSH4O15457 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 C4BPAP2-201ENST00000428434 478 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 RPS3AP54-201ENST00000435535 734 ntBASIC4.93□□□□□ -1.62
MSH4O15457 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.93□□□□□ -1.62
MSH4O15457 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 VN1R32P-201ENST00000452234 905 ntBASIC4.93□□□□□ -1.62
MSH4O15457 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.93□□□□□ -1.62
MSH4O15457 RPL35AP15-201ENST00000468042 339 ntBASIC4.93□□□□□ -1.62
MSH4O15457 RN7SL303P-201ENST00000469773 251 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AC108022.1-201ENST00000493466 478 ntBASIC4.93□□□□□ -1.62
MSH4O15457 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.93□□□□□ -1.62
MSH4O15457 AC108043.1-201ENST00000512696 574 ntBASIC4.93□□□□□ -1.62
MSH4O15457 SNORA26.10-201ENST00000516427 141 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AP002981.1-201ENST00000517692 975 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.93□□□□□ -1.62
MSH4O15457 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 MIR3138-201ENST00000585238 82 ntBASIC4.93□□□□□ -1.62
MSH4O15457 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 AC019072.1-201ENST00000604535 1551 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AL354984.3-201ENST00000604803 325 ntBASIC4.93□□□□□ -1.62
MSH4O15457 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
MSH4O15457 AL353726.1-201ENST00000614041 1000 ntBASIC4.93□□□□□ -1.62
MSH4O15457 MLECP1-201ENST00000615893 709 ntBASIC4.93□□□□□ -1.62
MSH4O15457 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.93□□□□□ -1.62
MSH4O15457 AP000843.1-201ENST00000624880 701 ntBASIC4.93□□□□□ -1.62
MSH4O15457 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
MSH4O15457 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
MSH4O15457 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
MSH4O15457 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
MSH4O15457 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.92□□□□□ -1.62
MSH4O15457 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
MSH4O15457 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH4O15457 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH4O15457 RNU1-132P-201ENST00000364300 164 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AC068538.1-201ENST00000376856 336 ntBASIC4.92□□□□□ -1.62
MSH4O15457 RNU1-44P-201ENST00000384453 163 ntBASIC4.92□□□□□ -1.62
MSH4O15457 MIR195-201ENST00000385194 87 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AL078604.1-201ENST00000404609 466 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.92□□□□□ -1.62
MSH4O15457 SNRPFP2-201ENST00000440710 251 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.92□□□□□ -1.62
MSH4O15457 OR6C72P-201ENST00000451403 892 ntBASIC4.92□□□□□ -1.62
MSH4O15457 RPL7AP52-201ENST00000458096 790 ntBASIC4.92□□□□□ -1.62
MSH4O15457 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
MSH4O15457 RN7SL812P-201ENST00000493791 279 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.92□□□□□ -1.62
MSH4O15457 AC083829.1-201ENST00000503756 657 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.92□□□□□ -1.62
MSH4O15457 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.92□□□□□ -1.62
MSH4O15457 AC090151.1-201ENST00000520784 730 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.92□□□□□ -1.62
MSH4O15457 AC090515.3-201ENST00000560431 315 ntBASIC4.92□□□□□ -1.62
MSH4O15457 ATP5J2P6-201ENST00000565203 266 ntBASIC4.92□□□□□ -1.62
MSH4O15457 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.92□□□□□ -1.62
MSH4O15457 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
MSH4O15457 KPNA2P3-201ENST00000584190 848 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
MSH4O15457 AC067838.1-201ENST00000606064 577 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms