Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 RNA5SP453-201ENST00000362503 119 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SKP185-201ENST00000362813 326 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MIR585-201ENST00000384887 94 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MORF4L1P6-201ENST00000418771 268 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL365203.2-201ENST00000423444 196 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 BX119904.4-201ENST00000424402 301 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL390023.1-201ENST00000428836 262 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 BX276092.6-201ENST00000430476 250 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MTND1P32-201ENST00000433043 938 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC138761.5-201ENST00000433967 325 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC099670.2-201ENST00000435130 321 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL596266.1-201ENST00000448132 400 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 BX276092.8-201ENST00000455722 250 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL133244.1-201ENST00000456007 258 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SL188P-201ENST00000469842 285 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 RPS4XP1-201ENST00000482189 787 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC231760.1-201ENST00000498002 260 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 IGLV3-24-201ENST00000517477 197 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AP000619.3-201ENST00000535634 1127 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC092747.2-201ENST00000545069 983 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC004825.1-201ENST00000555068 586 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AL358072.1-201ENST00000604156 575 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC245008.1-201ENST00000608123 476 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AP005137.2-201ENST00000609238 400 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC055764.2-201ENST00000610089 670 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC090246.1-201ENST00000616499 426 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 MIR8080-201ENST00000622224 89 ntBASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB1Q9Y5F3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AL161912.4-201ENST00000623889 2468 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC083837.1-201ENST00000565297 2994 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC016745.2-201ENST00000608834 3443 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 AC092681.1-201ENST00000297369 291 ntBASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHB1Q9Y5F3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms