Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AL139095.3-201ENST00000419672 1203 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 MTND2P11-201ENST00000423638 648 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC006466.1-201ENST00000438721 289 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AL162591.2-201ENST00000449634 317 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 RN7SL610P-201ENST00000463845 291 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC053481.1-201ENST00000467217 306 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AL161616.1-201ENST00000611867 286 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 MIR6780A-201ENST00000615089 68 ntBASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF11Q9Y3C5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 DHX40P1-201ENST00000588725 1412 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RNU2-50P-201ENST00000410494 143 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AL445213.1-201ENST00000412589 747 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC019050.1-201ENST00000418508 492 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC006065.1-201ENST00000422539 802 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RPEP3-201ENST00000425462 676 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 FTH1P16-201ENST00000435241 552 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 ARL2BPP10-201ENST00000446487 531 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC073264.2-201ENST00000448886 166 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 RPL21P126-201ENST00000470049 478 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 ATP1B1P1-201ENST00000509767 915 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC084783.1-201ENST00000565846 910 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AP001160.4-201ENST00000596971 382 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC008782.1-201ENST00000603386 430 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC100827.5-201ENST00000615883 426 ntBASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF11Q9Y3C5 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 RAD17P1-201ENST00000418130 2042 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AC008033.1-201ENST00000216407 1162 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 OR4K15-201ENST00000305051 1216 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 MIR3065-201ENST00000390137 79 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 RNA5SP306-201ENST00000411087 107 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 YWHAEP5-201ENST00000431545 765 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 NDUFA5P1-201ENST00000433858 341 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AL450263.2-201ENST00000439400 589 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 AC114495.1-201ENST00000441274 436 ntBASIC4.23□□□□□ -1.73
RNF11Q9Y3C5 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms