Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RN7SL174P-201ENST00000475578 289 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 COX6B1P5-201ENST00000509843 249 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 PPBPP1-201ENST00000510807 373 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 NDUFB4P12-201ENST00000513465 390 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC104997.1-201ENST00000519761 717 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC074029.2-201ENST00000551045 634 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC091178.1-203ENST00000584586 279 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 HMGB2P1-201ENST00000591146 634 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC095055.1-201ENST00000603472 1113 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC022387.2-201ENST00000604050 448 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AL121932.1-201ENST00000605542 214 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 BNIP3P7-201ENST00000605641 516 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC084036.1-201ENST00000609190 508 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 RNA5SP440-201ENST00000612665 119 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC011472.4-201ENST00000615848 491 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AL353662.3-201ENST00000625131 237 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC136428.4-201ENST00000634254 1155 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 MIR4302-201ENST00000638058 60 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AC119674.1-220ENST00000641502 1048 ntBASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.82□□□□□ -1.8
RCL1Q9Y2P8 AL031119.1-201ENST00000404707 1879 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 MIR448-201ENST00000362131 111 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RNA5SP52-201ENST00000362448 134 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AMZ2P2-201ENST00000406819 1057 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LINC00993-201ENST00000420453 540 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RPL21P91-201ENST00000429231 479 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RPL7L1P9-201ENST00000431298 745 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC069285.2-201ENST00000440210 275 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC006967.1-201ENST00000467608 589 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RN7SL466P-201ENST00000497546 295 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC008694.2-201ENST00000517591 306 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 IGKV3D-34-201ENST00000522638 302 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC012146.2-201ENST00000576545 416 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC008759.1-201ENST00000589783 983 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AL096803.3-201ENST00000609032 532 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AC243654.2-201ENST00000612843 443 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AL627230.1-201ENST00000613077 211 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AL359513.1-201ENST00000614364 557 ntBASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RCL1Q9Y2P8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AC093311.1-201ENST00000506586 2021 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AC067945.1-201ENST00000342609 618 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 RNA5SP151-201ENST00000365632 117 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AL590762.2-201ENST00000395798 571 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 CHMP1B2P-201ENST00000399581 597 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 DUTP5-201ENST00000406790 469 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AL160275.2-201ENST00000412010 394 ntBASIC3.8□□□□□ -1.8
RCL1Q9Y2P8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms