Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VPS9D1Q9Y2B5 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 SALL1P1-201ENST00000438101 3837 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 SNORD27-201ENST00000363981 72 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 SNORD14.1-201ENST00000365609 90 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 OR52E6-202ENST00000379946 954 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL139327.1-201ENST00000382988 348 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 UBE2V1P2-201ENST00000397758 440 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 IGLC6-201ENST00000410078 317 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RNU6-1050P-201ENST00000410388 107 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 GSTA10P-201ENST00000412182 576 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RAC1P3-201ENST00000416129 580 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC092066.1-201ENST00000425131 317 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL133396.1-201ENST00000432048 687 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC007790.1-201ENST00000439081 782 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 ATP5LP2-201ENST00000440646 311 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC004980.3-201ENST00000447046 365 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC020550.1-201ENST00000447385 163 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 TDGF1P6-201ENST00000463873 448 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RN7SL36P-201ENST00000469345 276 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC026254.1-201ENST00000479473 431 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RN7SL869P-201ENST00000497032 300 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL445187.1-201ENST00000502685 260 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC022493.2-201ENST00000506122 481 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC116337.1-201ENST00000509680 687 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RNU5B-3P-201ENST00000516601 115 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 COX6CP8-201ENST00000522620 226 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 SRMP2-201ENST00000553832 916 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL049779.3-201ENST00000557141 606 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 MIR3689F-201ENST00000579617 66 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC012433.1-201ENST00000588916 398 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC129492.5-201ENST00000603489 315 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL391903.2-201ENST00000614532 247 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 DLEU2_5.1-201ENST00000615567 84 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AL355365.1-201ENST00000616480 294 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 PART1_3.1-201ENST00000619680 131 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC005790.1-201ENST00000619774 450 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC073488.8-201ENST00000631952 757 ntBASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VPS9D1Q9Y2B5 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 CDY19P-201ENST00000411668 1613 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
VPS9D1Q9Y2B5 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms