Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 CDY11P-201ENST00000447168 1651 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 RNA5SP372-201ENST00000390836 115 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AL157831.1-201ENST00000426134 473 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 SKP1P3-201ENST00000429280 487 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 RPL7AP52-201ENST00000458096 790 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC104164.2-201ENST00000496953 495 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC022616.2-201ENST00000523185 300 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 OR5BC1P-201ENST00000529327 739 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AL354984.3-201ENST00000604803 325 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AL121839.2-201ENST00000565058 6943 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AL513548.1-201ENST00000562904 1724 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AP001273.1-201ENST00000624493 3152 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC025031.4-201ENST00000621248 3271 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AL050305.1-201ENST00000399993 1230 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 SNORA81-201ENST00000408493 178 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 NPM1P33-201ENST00000438918 872 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 PHBP16-201ENST00000446318 950 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 ABCF2P2-201ENST00000450549 296 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 RPL35P6-201ENST00000490024 372 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 GOLGA5P1-201ENST00000507317 980 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC090515.3-201ENST00000560431 315 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 AL021997.2-201ENST00000615674 271 ntBASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NPC1L1Q9UHC9 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AP000756.2-201ENST00000624168 2567 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 SNRPFP1-201ENST00000414761 252 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 GAPDHP49-201ENST00000421421 961 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC011998.1-201ENST00000433403 117 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 ACTR3P2-201ENST00000439585 1257 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC041039.1-201ENST00000485656 536 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 ATP1B1P1-201ENST00000509767 915 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 RNA5SP73-201ENST00000516744 108 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AL109766.1-201ENST00000555080 552 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC023575.1-201ENST00000580510 358 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 FAM27D1-201ENST00000612308 341 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 MIR6716-201ENST00000613413 80 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AL445363.3-201ENST00000623080 671 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 AC011944.2-201ENST00000624440 683 ntBASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.91□□□□□ -1.46
NPC1L1Q9UHC9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
NPC1L1Q9UHC9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.9□□□□□ -1.46
NPC1L1Q9UHC9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
NPC1L1Q9UHC9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NPC1L1Q9UHC9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms