Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 STRADBP1-201ENST00000478954 1281 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 OR7E10P-201ENST00000526420 991 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL358913.1-201ENST00000554342 121 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 FAM106CP-201ENST00000582212 507 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AL133243.1-201ENST00000614487 366 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC015804.1-201ENST00000622935 435 ntBASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CLCF1Q9UBD9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 A2MP1-204ENST00000566278 4130 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AL672167.1-204ENST00000641875 3017 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC139713.2-214ENST00000642059 1811 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 MIR659-201ENST00000384963 97 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 RAB28P1-201ENST00000411517 641 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC013356.1-201ENST00000489027 564 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC020890.1-201ENST00000491837 504 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AP000859.1-201ENST00000525536 307 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AL356218.2-201ENST00000605264 187 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AL133370.2-201ENST00000619934 439 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC105105.5-201ENST00000622635 1294 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 RAD17P1-201ENST00000418130 2042 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 AC000123.3-201ENST00000624029 4975 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 MTCO1P15-201ENST00000529569 1526 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 RLIMP2-201ENST00000427891 1563 ntBASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCF1Q9UBD9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 RNU4-39P-201ENST00000362455 127 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 RNA5SP447-201ENST00000363749 119 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 MIR7-1-201ENST00000384871 110 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 RN7SKP247-201ENST00000411094 308 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 C4BPAP2-201ENST00000428434 478 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 MTCO1P45-201ENST00000431457 267 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 NDUFA5P1-201ENST00000433858 341 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms