Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 NAP1L1P3-201ENST00000462291 880 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RPL7P40-201ENST00000481703 745 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RN7SL97P-201ENST00000486780 299 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RPL21P131-201ENST00000497298 483 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 SNRPCP2-201ENST00000504370 475 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RNU6-941P-201ENST00000516346 108 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CCDC58P3-201ENST00000590792 430 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC114878.2-201ENST00000604863 1251 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC093783.1-201ENST00000612976 329 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC108359.1-201ENST00000616451 1211 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC021755.4-201ENST00000616620 456 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 RLIMP2-201ENST00000427891 1563 ntBASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
USP29Q9HBJ7 HSPA8P18-201ENST00000439846 1928 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL731532.2-201ENST00000623542 1953 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RNU6-236P-201ENST00000363886 106 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC104297.1-201ENST00000393779 870 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RNU4-22P-201ENST00000411058 166 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL445213.1-201ENST00000412589 747 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL590806.1-201ENST00000415818 853 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 OR2X1P-201ENST00000421144 687 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 ETF1P3-201ENST00000430422 1160 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL035458.1-201ENST00000433096 585 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL772161.1-201ENST00000439130 476 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 TRY2P-201ENST00000448860 689 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 ZNF886P-201ENST00000450781 723 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AL389915.2-201ENST00000454576 441 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RPS4XP12-201ENST00000461747 709 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC107015.1-201ENST00000466902 747 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RN7SL189P-201ENST00000468631 289 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RPS4XP6-201ENST00000477670 797 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC109462.1-201ENST00000491087 368 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC008953.1-201ENST00000497334 318 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 RNU6-1308P-201ENST00000516817 103 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 MRPS36P3-201ENST00000519284 130 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC087897.1-201ENST00000550134 156 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 MIR4646-201ENST00000580775 63 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 BNIP3P24-201ENST00000593398 557 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC087763.1-201ENST00000603391 286 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC011374.2-201ENST00000607135 526 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 OR2BH1P-201ENST00000608850 864 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AP003485.2-201ENST00000623636 610 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC099786.3-201ENST00000565735 1410 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 NXF4-202ENST00000416098 1465 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.36□□□□□ -1.55
USP29Q9HBJ7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP29Q9HBJ7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP29Q9HBJ7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms