Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 VN1R51P-201ENST00000411675 945 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL513325.1-201ENST00000417716 1034 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 SFR1P2-201ENST00000421841 730 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC108075.1-201ENST00000424692 529 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL158073.1-201ENST00000426848 1104 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AP001324.1-201ENST00000428553 399 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL121776.1-201ENST00000429337 372 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 RPL12P46-201ENST00000436610 195 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL606490.1-201ENST00000452266 765 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 RPL7P51-201ENST00000490532 749 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC005412.2-201ENST00000492004 341 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 GTF2IP9-201ENST00000502460 301 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 PRELID3BP4-201ENST00000515476 571 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 BX510359.5-201ENST00000515651 304 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 OR7E13P-201ENST00000526052 910 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC018754.1-201ENST00000607486 925 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC093673.2-201ENST00000609674 331 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AC079395.2-201ENST00000610982 737 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL139407.1-201ENST00000613826 1175 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 AL049737.1-201ENST00000413920 1403 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 BRAFP1-201ENST00000445336 2703 ntBASIC4.95□□□□□ -1.62
BRF2Q9HAW0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BRF2Q9HAW0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AL353743.4-201ENST00000422653 1547 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC073136.1-201ENST00000449426 2884 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RNU6-236P-201ENST00000363886 106 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RNU6-146P-201ENST00000384602 108 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 OOSP1-201ENST00000398992 1270 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RNU2-65P-201ENST00000410162 185 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC104333.2-201ENST00000422630 192 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 EI24P4-201ENST00000423683 1078 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC114973.1-201ENST00000429057 632 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC004980.3-201ENST00000447046 365 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC104164.3-201ENST00000467363 1258 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 MTND6P6-201ENST00000478031 263 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RPL7P39-201ENST00000481157 744 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RN7SL441P-201ENST00000492388 296 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC023050.1-201ENST00000498198 304 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC098799.3-201ENST00000506095 438 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 MORF4L1P3-201ENST00000525966 950 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC024940.3-201ENST00000538551 316 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AL049779.2-201ENST00000553847 315 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 ZNF971P-201ENST00000562068 1249 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 CYP2C60P-201ENST00000566088 139 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC023824.3-201ENST00000569003 562 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 DPRXP4-201ENST00000578053 568 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 MIR4509-3-201ENST00000578671 94 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.94□□□□□ -1.62
BRF2Q9HAW0 MIR4509-2-201ENST00000583920 94 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 PCNAP1-202ENST00000595299 752 ntBASIC4.94□□□□□ -1.62
BRF2Q9HAW0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms