Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BX284632.1-201ENST00000478218 541 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 PARP4P3-201ENST00000510265 317 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 OR5M7P-201ENST00000526140 972 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 MIR3691-201ENST00000578066 90 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AC011487.3-201ENST00000593607 453 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 Z98200.1-201ENST00000607298 470 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 SNORA35B-201ENST00000607417 129 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AL031666.3-201ENST00000609320 1006 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 AC112694.2-201ENST00000623697 768 ntBASIC5.47□□□□□ -1.53
UPF2Q9HAU5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.47□□□□□ -1.53
UPF2Q9HAU5 LINC00622-201ENST00000562811 1570 ntBASIC5.46□□□□□ -1.53
UPF2Q9HAU5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UPF2Q9HAU5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.46□□□□□ -1.53
UPF2Q9HAU5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
UPF2Q9HAU5 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 RNU4-4P-201ENST00000364588 130 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 RHOT1P2-201ENST00000366423 333 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 RNU6-891P-201ENST00000384280 111 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 RNU1-106P-201ENST00000384382 164 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 MIR323B-201ENST00000385269 82 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 SDHCP2-201ENST00000398565 501 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC013470.3-201ENST00000420252 1194 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 EIF2S2P3-201ENST00000428356 999 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC007559.1-201ENST00000428736 355 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 NRBF2P3-201ENST00000432731 865 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC016831.4-201ENST00000438302 307 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 MTCO3P43-201ENST00000440974 771 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 RNA5SP497-201ENST00000516081 97 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 PHBP17-201ENST00000528576 541 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 MIR1269B-201ENST00000580405 75 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AL160290.3-201ENST00000604869 165 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC015802.5-201ENST00000607478 399 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AL158196.1-201ENST00000616786 434 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 LINC00901.1-201ENST00000617252 152 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AC105074.1-201ENST00000623380 3095 ntBASIC5.46□□□□□ -1.54
UPF2Q9HAU5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
UPF2Q9HAU5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 KPNA2P2-201ENST00000419546 1489 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 MIR93-201ENST00000385024 80 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 TRIM60P17-201ENST00000415181 719 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 RPS12P10-201ENST00000427031 377 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 SDR42E1P3-201ENST00000438345 502 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC073850.1-201ENST00000449243 255 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 OR52J1P-201ENST00000450596 932 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 RBMY2TP-201ENST00000451162 947 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC012671.1-201ENST00000451912 203 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 OR2AF1P-201ENST00000454899 889 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 RNU2-30P-201ENST00000516209 141 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 RPL23AP97-201ENST00000568955 471 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 MIR4489-201ENST00000578869 62 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 RN7SL753P-201ENST00000581238 290 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC008638.3-201ENST00000603341 463 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC087763.1-201ENST00000603391 286 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 SUMO2P15-201ENST00000604285 278 ntBASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.45□□□□□ -1.54
UPF2Q9HAU5 AC104307.1-201ENST00000616142 196 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms