Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC092570.3-201ENST00000420113 693 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC069277.2-201ENST00000454211 432 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RPL12P20-201ENST00000475538 479 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RN7SL817P-201ENST00000480777 288 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC090151.1-201ENST00000520784 730 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC107918.3-201ENST00000533272 382 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AP006289.1-201ENST00000538089 277 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC027455.1-201ENST00000574104 594 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC087283.1-201ENST00000604029 1074 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AP000542.2-201ENST00000623199 6179 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 MAPK10-320ENST00000641462 6696 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 RPS4XP9-201ENST00000405151 780 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 RN7SKP106-201ENST00000410832 272 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC004448.2-201ENST00000422360 586 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC245028.1-201ENST00000423259 256 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 ARL4AP3-201ENST00000441452 574 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 RPS6P2-201ENST00000454208 705 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 SULT1C2P2-201ENST00000562517 294 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC009303.3-201ENST00000591103 736 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 SNX6P1-201ENST00000601728 1224 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 GMCL1P2-201ENST00000605230 823 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC091905.2-201ENST00000623143 306 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCSER1Q9C0I3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 SNORD113.2-201ENST00000364166 89 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 MIR659-201ENST00000384963 97 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 MTCYBP7-201ENST00000419540 1134 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 AC062016.2-201ENST00000420950 676 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 RPL23AP4-201ENST00000427757 463 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 ARL5AP3-201ENST00000439327 386 ntBASIC5.09□□□□□ -1.59
CCSER1Q9C0I3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms