Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LSM3P2-201ENST00000551246 273 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 MIR1273E-201ENST00000581165 102 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 DUXAP11-201ENST00000603858 526 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AL163642.2-201ENST00000604722 1019 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC022509.4-201ENST00000621404 572 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC011755.1-201ENST00000623763 2049 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 CASC19-206ENST00000641028 1430 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
AMBRA1Q9C0C7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 NSRP1P1-201ENST00000444067 1693 ntBASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
AMBRA1Q9C0C7 PDZK1P1-202ENST00000425209 1350 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 TMSB4XP2-201ENST00000335179 210 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL159987.1-201ENST00000347911 293 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 RNA5SP242-201ENST00000364171 118 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL034374.1-201ENST00000406329 351 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL589823.1-201ENST00000429577 183 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC073465.2-201ENST00000440938 498 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL929288.2-201ENST00000446368 407 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 ATP5LP5-201ENST00000483050 299 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 RN7SL570P-201ENST00000484405 292 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC104971.1-201ENST00000495117 578 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 MTCYBP37-201ENST00000510642 1133 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC026782.2-201ENST00000510845 636 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 IGLV3-24-201ENST00000517477 197 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC023632.1-201ENST00000518463 375 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 PCNAP4-201ENST00000532690 730 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AP000619.3-201ENST00000535634 1127 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 BNIP3P26-201ENST00000600827 554 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AP000238.1-201ENST00000608759 426 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AL359757.1-201ENST00000623176 255 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC138965.3-201ENST00000623875 498 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CCT8P1-201ENST00000413611 1657 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms