Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 EOGT-210ENST00000615922 1931 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 VN2R3P-201ENST00000422626 1412 ntBASIC5.48□□□□□ -1.53
RPAP1Q9BWH6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 PPIAP13-201ENST00000434706 478 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL591623.2-201ENST00000449978 222 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC022795.1-201ENST00000473808 480 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 RPS26P24-201ENST00000497656 331 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 HMGB2P1-201ENST00000591146 634 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 Z95331.1-201ENST00000623075 23112 ntBASIC5.47□□□□□ -1.53
RPAP1Q9BWH6 AL391684.1-202ENST00000641293 1636 ntBASIC5.46□□□□□ -1.53
RPAP1Q9BWH6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
RPAP1Q9BWH6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 RNA5SP372-201ENST00000390836 115 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 ST13P16-201ENST00000401760 781 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 RNA5SP146-201ENST00000410743 123 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 RAD23BP1-201ENST00000421404 1227 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 RN7SL810P-201ENST00000493031 276 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 CYCSP28-201ENST00000534284 321 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 AL161912.3-201ENST00000605404 628 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 AL392048.1-201ENST00000613946 534 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 AL031595.2-201ENST00000624215 19071 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 HSPD1P14-201ENST00000432666 1618 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 CDY11P-201ENST00000447168 1651 ntBASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RPAP1Q9BWH6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 CPHL1P-201ENST00000461341 3407 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 CASC19-204ENST00000641001 2055 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 RN7SKP263-201ENST00000411194 309 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 ACTR3P2-201ENST00000439585 1257 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 RN7SL303P-201ENST00000469773 251 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 RPL21P126-201ENST00000470049 478 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AC112184.1-201ENST00000505179 312 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 IGLVIV-65-201ENST00000517313 360 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 NPM1P6-201ENST00000521088 871 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 MIR3138-201ENST00000585238 82 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AC010201.1-201ENST00000605051 540 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AP002360.3-201ENST00000607673 710 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 AL353726.1-201ENST00000614041 1000 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 LINC00622-201ENST00000562811 1570 ntBASIC5.45□□□□□ -1.54
RPAP1Q9BWH6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms