Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SULT1C2P2-201ENST00000562517 294 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 AC093591.2-201ENST00000565254 3843 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC115085.1-201ENST00000588924 229 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC018714.1-201ENST00000605028 208 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC245014.3-201ENST00000618589 347 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 AL607023.1-201ENST00000620045 248 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 AC007494.3-201ENST00000624660 743 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 AC134882.1-201ENST00000603738 1676 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 TCP11X1-202ENST00000622971 1372 ntBASIC5.26□□□□□ -1.57
VRK1Q99986 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VRK1Q99986 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VRK1Q99986 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.26□□□□□ -1.57
VRK1Q99986 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC011477.1-204ENST00000623416 1325 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VRK1Q99986 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 AF287957.1-201ENST00000607368 1595 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 PARP4P2-201ENST00000446672 3326 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK1Q99986 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
VRK1Q99986 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 GSTM3P2-201ENST00000412746 530 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 RPS3P2-201ENST00000421346 701 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AL354766.1-201ENST00000423396 542 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 RPL31P54-201ENST00000429803 370 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC129850.1-201ENST00000436203 508 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 MTCO3P11-201ENST00000455103 774 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 RPL21P71-201ENST00000465598 459 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 RPS7P6-201ENST00000485777 579 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC092045.1-201ENST00000495716 1231 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC025458.1-201ENST00000506046 166 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 RNA5SP340-201ENST00000517132 107 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 TRIM77BP-201ENST00000524985 1119 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AP004609.2-201ENST00000532177 190 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
VRK1Q99986 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC023161.2-201ENST00000551218 780 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC007956.1-201ENST00000555623 542 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 ACTR3BP3-201ENST00000565577 979 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.25□□□□□ -1.57
VRK1Q99986 AP005262.1-201ENST00000582646 997 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.25□□□□□ -1.57
VRK1Q99986 AP000811.1-201ENST00000603803 651 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 AC091488.1-201ENST00000604239 660 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC003992.1-201ENST00000635364 557 ntBASIC5.25□□□□□ -1.57
VRK1Q99986 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.25□□□□□ -1.57
VRK1Q99986 AC093775.1-201ENST00000624154 1868 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms