Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 Y_RNA.158-201ENST00000363651 101 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 U3.12-201ENST00000364498 214 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RNU4-20P-201ENST00000365601 151 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 SNORA64.3-201ENST00000365647 134 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RNU6-38P-201ENST00000384085 107 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RNU6-921P-201ENST00000384361 107 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 SNORA70I-201ENST00000384544 135 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL023807.1-201ENST00000407932 359 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RN7SKP86-201ENST00000410454 332 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RNU6-370P-201ENST00000411008 104 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 PTPN2P1-201ENST00000423212 1072 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC022022.1-201ENST00000430304 178 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 PUDPP2-201ENST00000431423 643 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RPL34P6-201ENST00000432390 345 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 Z98752.2-201ENST00000432727 312 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 RNU6-333P-201ENST00000459117 107 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RN7SL55P-201ENST00000464534 297 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 RPL5P22-201ENST00000480199 884 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC233724.10-201ENST00000510454 409 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 SCARNA18.2-201ENST00000516882 84 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC027308.1-201ENST00000517993 110 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 COPS8P3-201ENST00000526024 482 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC011979.2-201ENST00000527568 352 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 APOOP3-201ENST00000536787 586 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC018552.3-201ENST00000567416 561 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 OR1E3-201ENST00000575608 948 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 RN7SL473P-201ENST00000580341 299 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC083806.3-201ENST00000614016 455 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 AC022400.9-201ENST00000623633 273 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL136146.1-201ENST00000529830 1667 ntBASIC7.5□□□□□ -1.21
PHOX2BQ99453 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 NF1P2-201ENST00000556855 2505 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 TANK-205ENST00000405852 2155 ntTSL 5 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 OR8B9P-202ENST00000642028 5216 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
PHOX2BQ99453 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 RNA5SP114-201ENST00000363780 113 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 RNU6-343P-201ENST00000364709 104 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 SNORA51.6-201ENST00000384151 125 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 MIR649-201ENST00000384843 97 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL078604.1-201ENST00000404609 466 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 RN7SKP158-201ENST00000410453 326 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 RN7SKP229-201ENST00000410465 302 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 RN7SKP144-201ENST00000411108 279 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 AL139396.1-201ENST00000421137 167 ntBASIC7.49□□□□□ -1.21
PHOX2BQ99453 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.49□□□□□ -1.21
PHOX2BQ99453 RPL3P11-201ENST00000434028 1146 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms