Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RNU1-15P-201ENST00000353977 144 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RNA5SP28-201ENST00000363841 119 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 VN1R8P-201ENST00000407739 893 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RNA5SP36-201ENST00000410197 133 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RN7SKP216-201ENST00000411050 312 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AL356968.2-201ENST00000412769 1257 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RPS23P10-201ENST00000416185 486 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 PRELID3BP10-201ENST00000431957 584 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RN7SL303P-201ENST00000469773 251 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RN7SL481P-201ENST00000477764 299 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RPL35P6-201ENST00000490024 372 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 RN7SL691P-201ENST00000494487 301 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC104164.2-201ENST00000496953 495 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC093890.1-201ENST00000502554 540 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 IGLV3-26-201ENST00000520756 302 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 PSMB7P1-201ENST00000556349 514 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC023389.2-201ENST00000580031 955 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC119501.1-201ENST00000603646 475 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC015813.6-201ENST00000624409 5808 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC011944.2-201ENST00000624440 683 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 AC008013.2-202ENST00000637965 364 ntBASIC3.57□□□□□ -1.84
GAFA1Q96PS6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GAFA1Q96PS6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC017104.4-201ENST00000636283 1592 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RNU1-14P-201ENST00000362759 152 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RNU1-132P-201ENST00000364300 164 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RN7SKP235-201ENST00000410662 305 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RPL6P29-201ENST00000414863 865 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 P2RY10P2-201ENST00000416730 913 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AL161631.1-201ENST00000417933 486 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RBMY1KP-201ENST00000423480 476 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC073143.1-201ENST00000436316 395 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 ACTR3P2-201ENST00000439585 1257 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 EEF1A1P1-201ENST00000447052 739 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RPL23AP81-201ENST00000455252 467 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC079804.1-201ENST00000461922 436 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC041039.1-201ENST00000485656 536 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC108145.1-201ENST00000503770 153 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AL592156.1-201ENST00000508758 304 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC008958.1-201ENST00000511047 682 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RNA5SP49-201ENST00000516450 115 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RNA5SP519-201ENST00000516480 119 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 RNA5SP73-201ENST00000516744 108 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AC114781.5-201ENST00000615297 108 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AP000843.1-201ENST00000624880 701 ntBASIC3.56□□□□□ -1.84
GAFA1Q96PS6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.56□□□□□ -1.84
GAFA1Q96PS6 CCT8P1-201ENST00000413611 1657 ntBASIC3.55□□□□□ -1.84
GAFA1Q96PS6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
GAFA1Q96PS6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms