Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.09□□□□□ -1.43
USP47Q96K76 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 AC025750.1-201ENST00000399891 379 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 SEPT7P8-201ENST00000413308 775 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 UBTFL3-201ENST00000418934 1024 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 AL157831.1-201ENST00000426134 473 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 UBTFL6-201ENST00000477929 1024 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 RPL35P6-201ENST00000490024 372 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 AC104164.2-201ENST00000496953 495 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.09□□□□□ -1.43
USP47Q96K76 AL352979.3-201ENST00000553515 247 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 MIR92B-201ENST00000607575 96 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 AL021997.2-201ENST00000615674 271 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.09□□□□□ -1.43
USP47Q96K76 AL139254.3-201ENST00000641097 674 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 AC083843.2-201ENST00000568248 6253 ntBASIC6.09□□□□□ -1.43
USP47Q96K76 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.09□□□□□ -1.43
USP47Q96K76 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.09□□□□□ -1.43
USP47Q96K76 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USP47Q96K76 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
USP47Q96K76 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC6.09□□□□□ -1.44
USP47Q96K76 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
USP47Q96K76 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
USP47Q96K76 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
USP47Q96K76 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 RNU1-132P-201ENST00000364300 164 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.08□□□□□ -1.44
USP47Q96K76 AL356968.2-201ENST00000412769 1257 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.08□□□□□ -1.44
USP47Q96K76 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.08□□□□□ -1.44
USP47Q96K76 AL359073.1-201ENST00000448036 403 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 AC008958.1-201ENST00000511047 682 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 MIR2116-201ENST00000517221 80 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 MRPL49P2-201ENST00000521066 465 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.08□□□□□ -1.44
USP47Q96K76 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.08□□□□□ -1.44
USP47Q96K76 SLC25A36P1-201ENST00000590111 465 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.08□□□□□ -1.44
USP47Q96K76 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.08□□□□□ -1.44
USP47Q96K76 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 AC005005.4-201ENST00000623789 16698 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
USP47Q96K76 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 AC099654.3-201ENST00000447087 1546 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC6.08□□□□□ -1.44
USP47Q96K76 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
USP47Q96K76 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.08□□□□□ -1.44
USP47Q96K76 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.08□□□□□ -1.44
USP47Q96K76 RN7SKP186-201ENST00000365371 303 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.07□□□□□ -1.44
USP47Q96K76 NUTF2P3-201ENST00000448540 384 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.07□□□□□ -1.44
USP47Q96K76 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.07□□□□□ -1.44
USP47Q96K76 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.07□□□□□ -1.44
USP47Q96K76 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
USP47Q96K76 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.07□□□□□ -1.44
USP47Q96K76 CYCSP29-201ENST00000533731 318 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USP47Q96K76 PCA3_2.1-201ENST00000612507 409 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 AL445567.2-201ENST00000618935 498 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 AP001157.1-201ENST00000550837 2339 ntBASIC6.07□□□□□ -1.44
USP47Q96K76 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.07□□□□□ -1.44
USP47Q96K76 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
USP47Q96K76 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.07□□□□□ -1.44
USP47Q96K76 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.06□□□□□ -1.44
USP47Q96K76 AC010266.2-201ENST00000564741 3255 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.06□□□□□ -1.44
USP47Q96K76 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USP47Q96K76 AC011933.1-201ENST00000413334 321 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.06□□□□□ -1.44
USP47Q96K76 ARL4AP3-201ENST00000441452 574 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 AC114755.5-201ENST00000447760 831 ntBASIC6.06□□□□□ -1.44
USP47Q96K76 ABCF2P2-201ENST00000450549 296 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms