Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HPS3Q969F9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 RNU1-19P-201ENST00000363306 165 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 MTCO2P31-201ENST00000402702 684 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AL590290.1-201ENST00000405336 380 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 OR3A2-201ENST00000408891 1076 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 RNA5SP487-201ENST00000410186 122 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HPS3Q969F9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AL935212.3-201ENST00000450729 284 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 SIAH1P1-201ENST00000479411 923 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC108693.1-201ENST00000496068 432 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC002456.2-201ENST00000509356 380 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 MTCO3P15-201ENST00000526563 574 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC009712.1-201ENST00000564938 316 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC008814.1-201ENST00000603797 406 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AC025811.1-201ENST00000604312 472 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AC005252.1-201ENST00000604518 1063 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AC025588.2-201ENST00000604851 466 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.83□□□□□ -1.48
HPS3Q969F9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 SAMMSON-209ENST00000641222 1100 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 ZNF663P-202ENST00000641770 1131 ntBASIC5.83□□□□□ -1.48
HPS3Q969F9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HPS3Q969F9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.83□□□□□ -1.48
HPS3Q969F9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HPS3Q969F9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 AL606537.1-201ENST00000607258 2011 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
HPS3Q969F9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HPS3Q969F9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 RNU1-87P-201ENST00000363727 170 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 RN7SKP160-201ENST00000363804 340 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.82□□□□□ -1.48
HPS3Q969F9 OR52E6-202ENST00000379946 954 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.82□□□□□ -1.48
HPS3Q969F9 Y_RNA.472-201ENST00000384322 102 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 HIGD1AP12-201ENST00000427832 281 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 RPS24P8-201ENST00000431490 402 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC090018.1-201ENST00000434369 367 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.82□□□□□ -1.48
HPS3Q969F9 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 MTCO2P20-201ENST00000437339 673 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 RPL5P25-201ENST00000441148 775 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 Z77249.1-201ENST00000444622 1175 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 AL929288.2-201ENST00000446368 407 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 NPM1P13-201ENST00000452663 865 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC011225.1-201ENST00000457751 369 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC005410.1-202ENST00000460347 485 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.82□□□□□ -1.48
HPS3Q969F9 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 IGKV2-18-201ENST00000522607 343 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 UBTFL10-201ENST00000528532 562 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.82□□□□□ -1.48
HPS3Q969F9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.82□□□□□ -1.48
HPS3Q969F9 MTCYBP13-201ENST00000578634 1093 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.82□□□□□ -1.48
HPS3Q969F9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.82□□□□□ -1.48
HPS3Q969F9 OR7E18P-201ENST00000592589 702 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.82□□□□□ -1.48
HPS3Q969F9 BNIP3P4-201ENST00000604946 565 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AL445423.1-201ENST00000609941 536 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC055764.2-201ENST00000610089 670 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 AC009237.15-201ENST00000610252 501 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 SDR42E1P1-201ENST00000611327 477 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 uc_338.9-201ENST00000617424 182 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 U6.48-201ENST00000618523 106 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HPS3Q969F9 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 SAMMSON-213ENST00000641336 1521 ntBASIC5.82□□□□□ -1.48
HPS3Q969F9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HPS3Q969F9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms