Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC007424.1-203ENST00000554613 687 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.92□□□□□ -1.78
AP3S1Q92572 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC011453.2-201ENST00000603737 729 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC010680.3-201ENST00000604215 520 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC090953.1-201ENST00000604305 1092 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 MEMO1P5-201ENST00000604810 406 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC010200.2-201ENST00000605098 235 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC012603.1-201ENST00000606424 528 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC008785.1-201ENST00000624475 456 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AC136428.4-201ENST00000634254 1155 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.92□□□□□ -1.78
AP3S1Q92572 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.92□□□□□ -1.78
AP3S1Q92572 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP3S1Q92572 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.92□□□□□ -1.78
AP3S1Q92572 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP3S1Q92572 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP3S1Q92572 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.92□□□□□ -1.78
AP3S1Q92572 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
AP3S1Q92572 A2MP1-204ENST00000566278 4130 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
AP3S1Q92572 AC007529.1-201ENST00000418574 2178 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 NCLP2-201ENST00000416078 1462 ntBASIC3.92□□□□□ -1.78
AP3S1Q92572 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
AP3S1Q92572 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 MAPK10-263ENST00000641052 4307 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.91□□□□□ -1.78
AP3S1Q92572 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
AP3S1Q92572 RNA5SP105-201ENST00000391123 113 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 RPS3P2-201ENST00000421346 701 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 RPL12P28-201ENST00000430852 489 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 MTND2P25-201ENST00000449028 610 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 RPL7P31-201ENST00000450192 724 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 PSMA2P2-201ENST00000504319 686 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AL592156.1-201ENST00000508758 304 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 IGHV3-32-201ENST00000519182 355 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.91□□□□□ -1.78
AP3S1Q92572 NANOGNBP2-201ENST00000544753 553 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.91□□□□□ -1.78
AP3S1Q92572 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 FAM106CP-201ENST00000582212 507 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC020914.4-201ENST00000597690 277 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC020910.3-201ENST00000603701 874 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AL160290.3-201ENST00000604869 165 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AL357153.4-201ENST00000620487 1016 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC073593.1-201ENST00000624500 411 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.91□□□□□ -1.78
AP3S1Q92572 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.91□□□□□ -1.78
AP3S1Q92572 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
AP3S1Q92572 AC008725.1-201ENST00000605123 2263 ntBASIC3.91□□□□□ -1.78
AP3S1Q92572 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.91□□□□□ -1.78
AP3S1Q92572 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
AP3S1Q92572 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
AP3S1Q92572 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.9□□□□□ -1.78
AP3S1Q92572 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.9□□□□□ -1.78
AP3S1Q92572 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
AP3S1Q92572 AC017007.4-201ENST00000503353 1352 ntBASIC3.9□□□□□ -1.78
AP3S1Q92572 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.9□□□□□ -1.78
AP3S1Q92572 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.9□□□□□ -1.78
AP3S1Q92572 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP3S1Q92572 U3.2-201ENST00000362981 210 ntBASIC3.9□□□□□ -1.79
AP3S1Q92572 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP3S1Q92572 LYPLA1P3-201ENST00000402650 695 ntBASIC3.9□□□□□ -1.79
AP3S1Q92572 MIR1911-201ENST00000410783 80 ntBASIC3.9□□□□□ -1.79
AP3S1Q92572 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
AP3S1Q92572 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC3.9□□□□□ -1.79
AP3S1Q92572 AL138785.1-201ENST00000425821 331 ntBASIC3.9□□□□□ -1.79
AP3S1Q92572 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.9□□□□□ -1.79
AP3S1Q92572 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.9□□□□□ -1.79
AP3S1Q92572 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
AP3S1Q92572 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms