Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC018552.1-201ENST00000562099 811 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 MIR4737-201ENST00000583979 81 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 RN7SL435P-201ENST00000584418 282 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC091057.3-201ENST00000602684 733 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC068620.3-201ENST00000602749 560 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC023762.1-201ENST00000603280 584 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 AL031320.1-201ENST00000604177 357 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC004241.3-201ENST00000611728 517 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC018926.1-201ENST00000616335 435 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC006927.4-201ENST00000639187 543 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 OR5AC4P-202ENST00000642086 985 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF4Q92544 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF4Q92544 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 AC006210.2-201ENST00000367074 1545 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TM9SF4Q92544 MTCO1P4-201ENST00000520516 1409 ntBASIC4.71□□□□□ -1.66
TM9SF4Q92544 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM9SF4Q92544 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 BTBD10P1-201ENST00000549824 1352 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 RNA5SP428-201ENST00000365129 132 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AL672167.2-201ENST00000377164 879 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 RNU6-729P-201ENST00000384399 107 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 RPL7AP61-201ENST00000443410 636 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 BX842559.2-201ENST00000451418 605 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 RN7SL443P-201ENST00000464331 290 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC104629.2-201ENST00000468627 598 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 RN7SL481P-201ENST00000477764 299 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 RPL7AP10-201ENST00000481016 791 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 RPS27AP18-201ENST00000515536 459 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC004923.2-201ENST00000529649 369 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 BNIP3P1-201ENST00000547295 580 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 GLRXP2-201ENST00000555594 321 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 MIR3667-201ENST00000581025 74 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC234771.5-201ENST00000600161 514 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 MTCO3P22-201ENST00000603219 784 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 AL592494.3-201ENST00000609485 464 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC019080.5-201ENST00000624891 757 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 TMEM30CP-203ENST00000637814 1035 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AL627171.1-201ENST00000618845 1308 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 AC083843.3-201ENST00000623679 2186 ntBASIC4.7□□□□□ -1.66
TM9SF4Q92544 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM9SF4Q92544 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.7□□□□□ -1.66
TM9SF4Q92544 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF4Q92544 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.69□□□□□ -1.66
TM9SF4Q92544 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF4Q92544 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
TM9SF4Q92544 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TM9SF4Q92544 RNA5SP223-201ENST00000365174 120 ntBASIC4.69□□□□□ -1.66
TM9SF4Q92544 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TM9SF4Q92544 RAB28P1-201ENST00000411517 641 ntBASIC4.69□□□□□ -1.66
TM9SF4Q92544 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms