Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL121594.5-201ENST00000631724 573 ntBASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB4Q8WW32 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AP001284.1-201ENST00000528393 2118 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 DDX18P4-201ENST00000511690 1966 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 RN7SKP95-201ENST00000362860 303 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 RNU6-353P-201ENST00000364266 108 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 RNA5SP90-201ENST00000364801 99 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 OR8V1P-201ENST00000395193 873 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 MIR1182-201ENST00000408363 97 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC092745.2-202ENST00000411880 369 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 SSR1P2-201ENST00000415208 787 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 REREP1Y-201ENST00000422655 198 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 RPL5P2-201ENST00000429598 854 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC008072.1-201ENST00000434254 824 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 REREP2Y-201ENST00000439103 200 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL592437.1-201ENST00000443781 492 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 TPT1P13-201ENST00000449760 499 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 MTND2P8-201ENST00000450555 1025 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC009220.1-201ENST00000451614 275 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC079168.1-201ENST00000458741 345 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AP000797.2-201ENST00000475768 606 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC134050.1-201ENST00000495088 933 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC114322.1-201ENST00000506771 926 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL671862.1-201ENST00000515851 349 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC008033.2-201ENST00000542626 177 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 BNIP3P1-201ENST00000547295 580 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC079075.1-201ENST00000559543 878 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC018552.1-201ENST00000562099 811 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AL031320.1-201ENST00000604177 357 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC055764.2-201ENST00000610089 670 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC244107.2-201ENST00000611773 76 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 uc_338.9-201ENST00000617424 182 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC123767.1-202ENST00000620407 817 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC112694.2-201ENST00000623697 768 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AP003400.3-201ENST00000624904 346 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC079097.1-201ENST00000512187 1399 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 AC097063.1-201ENST00000426714 1797 ntBASIC5.24□□□□□ -1.57
HMGB4Q8WW32 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB4Q8WW32 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 ANKRD36P1-201ENST00000344424 659 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 RN7SKP149-201ENST00000363008 344 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 U3.10-201ENST00000364459 214 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HMGB4Q8WW32 RNU6-906P-201ENST00000384700 70 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 MIR141-201ENST00000384975 95 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 U3.28-201ENST00000391249 210 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 FAR2P2-201ENST00000413041 594 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 CHEK2P3-201ENST00000416118 248 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 MRPS21P2-201ENST00000424704 264 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 FAR2P4-202ENST00000425399 584 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 USP9YP9-201ENST00000429406 715 ntBASIC5.23□□□□□ -1.57
HMGB4Q8WW32 MTCO3P21-201ENST00000430791 643 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms