Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC007996.1-201ENST00000620414 2821 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 PCAT14-202ENST00000627127 3935 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 CCT8P1-201ENST00000413611 1657 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RNA5SP27-201ENST00000363839 119 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 SNORA51.8-201ENST00000384234 132 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RN7SKP222-201ENST00000410651 315 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RPL7AP49-201ENST00000429522 581 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC022022.1-201ENST00000430304 178 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL591438.1-201ENST00000433508 581 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RHOT1P3-201ENST00000436571 331 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC000041.1-201ENST00000439655 175 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL353093.1-201ENST00000441292 436 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 TRY2P-201ENST00000448860 689 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC108161.1-201ENST00000461060 402 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC096741.1-201ENST00000472250 846 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RPS12P31-201ENST00000491419 398 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC118282.1-201ENST00000506408 765 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 MIR4789-201ENST00000577469 82 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 MIR3934-201ENST00000579806 107 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AP002906.1-201ENST00000603405 233 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL136295.6-201ENST00000610486 658 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL627230.1-201ENST00000613077 211 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AL591926.8-201ENST00000616876 211 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 CYCSP41-201ENST00000616920 296 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC073569.3-201ENST00000619055 682 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC008993.2-201ENST00000631744 806 ntBASIC4.74□□□□□ -1.65
BEST3Q8N1M1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BEST3Q8N1M1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RNU5B-1-201ENST00000363286 116 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RNU1-74P-201ENST00000384108 171 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 U6.112-201ENST00000384129 70 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RPL23AP59-201ENST00000399415 461 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AL078599.1-201ENST00000402075 293 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 ZNF602P-201ENST00000405929 924 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 VTA1P1-201ENST00000414044 866 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RBMY2KP-201ENST00000418221 992 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RPL34P20-201ENST00000442771 351 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC090804.1-201ENST00000448870 490 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 OFD1P3Y-201ENST00000453312 783 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC245028.2-201ENST00000458673 253 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 RPS3AP41-201ENST00000462701 778 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC083982.1-201ENST00000485679 344 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BEST3Q8N1M1 MYL12BP2-201ENST00000503948 512 ntBASIC4.73□□□□□ -1.65
BEST3Q8N1M1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms