Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RAB43Q86YS6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
RAB43Q86YS6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 OR56B2P-202ENST00000641377 2453 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AL359922.3-201ENST00000624779 1670 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 RPL32P3-201ENST00000359025 275 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 SNORA79B-201ENST00000410557 148 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC004448.2-201ENST00000422360 586 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 RPS27AP7-201ENST00000422792 455 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 RPL12P28-201ENST00000430852 489 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC091390.1-201ENST00000433904 331 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 MIR4277-201ENST00000578298 84 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC069061.3-201ENST00000582254 823 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 VN1R81P-201ENST00000602085 372 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC012557.1-201ENST00000607115 611 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC091979.2-201ENST00000607514 214 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC006338.2-201ENST00000616864 791 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC002044.3-201ENST00000623314 541 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 AL672167.1-203ENST00000641299 2975 ntBASIC4.43□□□□□ -1.7
RAB43Q86YS6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RAB43Q86YS6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RAB43Q86YS6 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB43Q86YS6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 IGKV7-3-201ENST00000357453 298 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 UQCRBP1-201ENST00000421129 336 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC006065.1-201ENST00000422539 802 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AL591363.1-201ENST00000450091 483 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 Z95152.1-201ENST00000453556 656 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC015795.1-201ENST00000513669 327 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC026688.1-201ENST00000520639 1168 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB43Q86YS6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC025423.2-201ENST00000537570 439 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AP005119.2-201ENST00000579735 1105 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC009643.2-201ENST00000603543 1448 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AL133338.2-201ENST00000604292 736 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC067838.1-201ENST00000606064 577 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 MIR6758-201ENST00000620653 63 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC005086.4-201ENST00000623065 213 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 AL359757.1-201ENST00000623176 255 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 AC017104.4-201ENST00000636283 1592 ntBASIC4.42□□□□□ -1.7
RAB43Q86YS6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB43Q86YS6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
RAB43Q86YS6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RAB43Q86YS6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RAB43Q86YS6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RAB43Q86YS6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.41□□□□□ -1.7
RAB43Q86YS6 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.41□□□□□ -1.7
RAB43Q86YS6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms