Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 MTND4P14-201ENST00000435799 1354 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC138915.3-201ENST00000562908 1389 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 DCAF13P1-201ENST00000495256 1330 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RNU6-1085P-201ENST00000363576 107 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RNU6-1318P-201ENST00000365389 103 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RN7SKP221-201ENST00000410420 301 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RNU2-42P-201ENST00000410697 113 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 HMGB3P20-201ENST00000417997 600 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 USP9YP16-201ENST00000430287 407 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 Z82190.1-201ENST00000454534 490 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 USP9YP23-201ENST00000455085 407 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RPS20P20-201ENST00000460498 340 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 HMGN2P25-201ENST00000486956 268 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC012170.1-201ENST00000495139 359 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 DYNLL1P6-201ENST00000503440 264 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC021146.2-201ENST00000504736 556 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC026782.1-201ENST00000512952 449 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RN7SKP13-201ENST00000515933 244 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RNU6-1046P-201ENST00000516538 107 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 RN7SKP183-201ENST00000517169 324 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 IGKV1D-22-201ENST00000518953 324 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AP005639.1-201ENST00000526939 192 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC087276.1-201ENST00000529659 480 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC011611.1-201ENST00000552179 197 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC243960.4-201ENST00000600532 288 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 VN1R107P-201ENST00000601784 209 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC012368.3-201ENST00000604190 219 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 SUGT1P3-202ENST00000604259 383 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 MIR6085-201ENST00000618314 110 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AC068213.1-201ENST00000625124 226 ntBASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.86□□□□□ -1.47
ATG4DQ86TL0 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.85□□□□□ -1.47
ATG4DQ86TL0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 ZNF402P-201ENST00000404435 3100 ntBASIC5.85□□□□□ -1.47
ATG4DQ86TL0 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4DQ86TL0 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms