Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 RPS4XP18-201ENST00000495480 763 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC026616.1-201ENST00000523157 525 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 SMARCE1P4-201ENST00000523647 241 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 NOP56P3-201ENST00000549457 385 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC079075.1-201ENST00000559543 878 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC090948.2-201ENST00000607363 564 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC239803.2-201ENST00000610161 430 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 INTS6P1-201ENST00000504674 2530 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC093311.1-201ENST00000506586 2021 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 AC104118.1-201ENST00000607625 1589 ntBASIC4.36□□□□□ -1.71
NIPAL3Q6P499 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC093535.2-201ENST00000624769 2326 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 SNORD96B-201ENST00000386148 79 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 OR13Z1P-201ENST00000416141 834 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC019050.1-201ENST00000418508 492 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 RPL12P28-201ENST00000430852 489 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 NPM1P33-201ENST00000438918 872 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 HMGB1P5-202ENST00000451497 985 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 RPL23AP37-201ENST00000479658 549 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 RNU6-362P-201ENST00000516736 90 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 RNU6-709P-201ENST00000517257 104 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 IGKV2D-10-201ENST00000520194 281 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 SNORA74C-1-201ENST00000580726 201 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 MIR4646-201ENST00000580775 63 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 MIR548Y-201ENST00000582739 110 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC012467.1-201ENST00000607740 256 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AP001521.2-201ENST00000608772 546 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC110792.4-201ENST00000609843 298 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC104307.1-201ENST00000616142 196 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC083843.3-201ENST00000623679 2186 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AL445487.1-201ENST00000415694 1580 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.35□□□□□ -1.71
NIPAL3Q6P499 MAPK10-263ENST00000641052 4307 ntBASIC4.35□□□□□ -1.71
NIPAL3Q6P499 DDX18P4-201ENST00000511690 1966 ntBASIC4.34□□□□□ -1.71
NIPAL3Q6P499 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NIPAL3Q6P499 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NIPAL3Q6P499 AL672167.1-203ENST00000641299 2975 ntBASIC4.34□□□□□ -1.71
NIPAL3Q6P499 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NIPAL3Q6P499 RN7SKP104-201ENST00000362605 328 ntBASIC4.34□□□□□ -1.71
NIPAL3Q6P499 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NIPAL3Q6P499 OR1F12-201ENST00000402365 945 ntBASIC4.34□□□□□ -1.71
NIPAL3Q6P499 RN7SKP247-201ENST00000411094 308 ntBASIC4.34□□□□□ -1.71
NIPAL3Q6P499 AC013404.1-201ENST00000413068 249 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms