Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP005019.3-201ENST00000620418 560 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 MAPK10-253ENST00000641010 4072 ntBASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.83□□□□□ -1.96
VPS13DQ5THJ4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 OR4A15-201ENST00000314706 1035 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC098799.3-201ENST00000506095 438 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC093014.1-201ENST00000548926 724 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 LINC02035-201ENST00000610128 5476 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL731532.2-201ENST00000623542 1953 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 U1.1-201ENST00000384101 164 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RNA5SP187-201ENST00000384400 119 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RNU1-95P-201ENST00000516357 160 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RNU1-128P-201ENST00000516704 160 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC010487.1-201ENST00000594408 1172 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 ERCC6-202ENST00000374127 1782 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 MIR133A2-201ENST00000347538 102 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL590806.1-201ENST00000415818 853 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GMPSP1-201ENST00000514075 579 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC124068.1-201ENST00000563131 678 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC091178.1-203ENST00000584586 279 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC079880.2-201ENST00000603790 1213 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL137843.1-201ENST00000605078 385 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL139247.1-201ENST00000422768 325 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 PAICSP4-201ENST00000517543 1253 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 MIR3944-201ENST00000581277 108 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AC025175.1-201ENST00000606482 759 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 AP001153.1-201ENST00000641024 338 ntBASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS13DQ5THJ4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 NAP1L4P1-201ENST00000319092 1157 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 MIR490-201ENST00000384865 128 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 HMGN2P27-201ENST00000427352 270 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AC069304.1-201ENST00000491593 704 ntBASIC2.81□□□□□ -1.96
VPS13DQ5THJ4 AL049874.2-201ENST00000492636 288 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms